RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 SDSLQ96GA7 329 aa13.85□□□□□ -0.19
UBC-208ENST00000540700 RBM38Q9H0Z9 239 aaKnown RBP13.85□□□□□ -0.19
UBC-208ENST00000540700 PLGRKTQ9HBL7 147 aa13.85□□□□□ -0.19
UBC-208ENST00000540700 KAAG1Q9UBP8 84 aa13.85□□□□□ -0.19
UBC-208ENST00000540700 CEPT1Q9Y6K0 416 aa13.85□□□□□ -0.19
UBC-208ENST00000540700 TMEM82A0PJX8 343 aa13.84□□□□□ -0.19
UBC-208ENST00000540700 NOTOA8MTQ0 251 aa13.84□□□□□ -0.19
UBC-208ENST00000540700 TMEM14DPA8MWL7 114 aa13.84□□□□□ -0.19
UBC-208ENST00000540700 LDLRAD4O15165 306 aa13.84□□□□□ -0.19
UBC-208ENST00000540700 SIGLEC5O15389 551 aa13.84□□□□□ -0.19
UBC-208ENST00000540700 TMPRSS2O15393 492 aa13.84□□□□□ -0.19
UBC-208ENST00000540700 HAND1O96004 215 aa13.84□□□□□ -0.19
UBC-208ENST00000540700 SERPINB10P48595 397 aa13.84□□□□□ -0.19
UBC-208ENST00000540700 COL10A1Q03692 680 aa13.84□□□□□ -0.19
UBC-208ENST00000540700 RAB11BQ15907 218 aa13.84□□□□□ -0.19
UBC-208ENST00000540700 SFXN4Q6P4A7 337 aa13.84□□□□□ -0.19
UBC-208ENST00000540700 RTN4RL2Q86UN3 420 aa13.84□□□□□ -0.19
UBC-208ENST00000540700 TPRA1Q86W33 373 aa13.84□□□□□ -0.19
UBC-208ENST00000540700 ZNRF1Q8ND25 227 aa13.84□□□□□ -0.19
UBC-208ENST00000540700 OR51D1Q8NGF3 324 aa13.84□□□□□ -0.19
UBC-208ENST00000540700 OR51T1Q8NGJ9 327 aa13.84□□□□□ -0.19
UBC-208ENST00000540700 FAM46BQ96A09 425 aa13.84□□□□□ -0.19
UBC-208ENST00000540700 MSI2Q96DH6 328 aaKnown RBP13.84□□□□□ -0.19
UBC-208ENST00000540700 NEIL1Q96FI4 390 aaPredicted RBP13.84□□□□□ -0.19
UBC-208ENST00000540700 MIOXQ9UGB7 285 aa13.84□□□□□ -0.19
UBC-208ENST00000540700 A0A0A6YYD4 124 aa13.83□□□□□ -0.2
UBC-208ENST00000540700 TMEM272A0A1B0GTI8 110 aa13.83□□□□□ -0.2
UBC-208ENST00000540700 AIPO00170 330 aa13.83□□□□□ -0.2
UBC-208ENST00000540700 DVL1O14640 695 aa13.83□□□□□ -0.2
UBC-208ENST00000540700 PSPNO60542 156 aa13.83□□□□□ -0.2
UBC-208ENST00000540700 ZNF737O75373 536 aa13.83□□□□□ -0.2
UBC-208ENST00000540700 IKZF1Q13422 519 aa13.83□□□□□ -0.2
UBC-208ENST00000540700 BLMHQ13867 455 aa13.83□□□□□ -0.2
UBC-208ENST00000540700 SPCS2Q15005 226 aa13.83□□□□□ -0.2
UBC-208ENST00000540700 KCNJ8Q15842 424 aa13.83□□□□□ -0.2
UBC-208ENST00000540700 NHLRC3Q5JS37 347 aa13.83□□□□□ -0.2
UBC-208ENST00000540700 WDR25Q64LD2 544 aaPredicted RBP13.83□□□□□ -0.2
UBC-208ENST00000540700 C12orf54Q6X4T0 127 aa13.83□□□□□ -0.2
UBC-208ENST00000540700 C17orf107Q6ZR85 190 aa13.83□□□□□ -0.2
UBC-208ENST00000540700 OSR2Q8N2R0 312 aa13.83□□□□□ -0.2
UBC-208ENST00000540700 BARHL1Q9BZE3 327 aa13.83□□□□□ -0.2
UBC-208ENST00000540700 RHOFQ9HBH0 211 aa13.83□□□□□ -0.2
UBC-208ENST00000540700 LPAR2Q9HBW0 351 aa13.83□□□□□ -0.2
UBC-208ENST00000540700 STEAP1Q9UHE8 339 aa13.83□□□□□ -0.2
UBC-208ENST00000540700 PCDHB10Q9UN67 800 aa13.83□□□□□ -0.2
UBC-208ENST00000540700 YLPM1P49750 1951 aaKnown RBP13.82□□□□□ -0.2
UBC-208ENST00000540700 A8MXK9 166 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 SIRPB1O00241 398 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 GEMIN2O14893 280 aaKnown RBP13.82□□□□□ -0.2
UBC-208ENST00000540700 KCNAB3O43448 404 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 NDUFA2O43678 99 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 CRTAPO75718 401 aaPredicted RBP13.82□□□□□ -0.2
UBC-208ENST00000540700 BPNT1O95861 308 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 OR2H2O95918 312 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 PAHP00439 452 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 MGMTP16455 207 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 PITPNBP48739 271 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 EFNB2P52799 333 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 RBM11P57052 281 aaKnown RBP13.82□□□□□ -0.2
UBC-208ENST00000540700 IL13RA2Q14627 380 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 C2orf76Q3KRA6 126 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 OR8B3Q8NGG8 313 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 FAM3DQ96BQ1 224 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 Q96M66 194 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 OR8B2Q96RD0 313 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 DNTTIP1Q9H147 329 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 LIN7BQ9HAP6 207 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 OR5V1Q9UGF6 321 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 DAPK2Q9UIK4 370 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 ST3GAL6Q9Y274 331 aa13.82□□□□□ -0.2
UBC-208ENST00000540700 TGP01266 2768 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 TRAV24A0A0B4J272 114 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 NKX6-3A6NJ46 265 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 C22orf46C9J442 243 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 SLC33A1O00400 549 aaPredicted RBP13.81□□□□□ -0.2
UBC-208ENST00000540700 TCF21O43680 179 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 ZNF780AO75290 641 aaPredicted RBP13.81□□□□□ -0.2
UBC-208ENST00000540700 MPIG6BO95866 241 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 TGFAP01135 160 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 IL1AP01583 271 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 GTF2F2P13984 249 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 SNRPBP14678 240 aaKnown RBP13.81□□□□□ -0.2
UBC-208ENST00000540700 OR3A1P47881 315 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 PSMD7P51665 324 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 IL13RA1P78552 427 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 LCN2P80188 198 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 PAX2Q02962 417 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 TAF9Q16594 264 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 SPIN3Q5JUX0 258 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 SIGIRRQ6IA17 410 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 DACT3Q96B18 629 aaPredicted RBP13.81□□□□□ -0.2
UBC-208ENST00000540700 ISOC1Q96CN7 298 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 RAB39BQ96DA2 213 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 S100A13Q99584 98 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 NICN1Q9BSH3 213 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 SSBP3Q9BWW4 388 aaPredicted RBP13.81□□□□□ -0.2
UBC-208ENST00000540700 SELENOIQ9C0D9 397 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 CHST6Q9GZX3 395 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 LPAR5Q9H1C0 372 aa13.81□□□□□ -0.2
UBC-208ENST00000540700 SEBOXQ9HB31 216 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms