RNA–Protein interactions for RNA: ENST00000526124.1

LTBP3-205, Transcript of latent transforming growth factor beta binding protein 3, human

TSL 5

Gene LTBP3, Length 347 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP3-205	ENST00000526124	DUX4L6	P0CJ89	424 aa		13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	DUX4L7	P0CJ90	424 aa		13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	SNRPB	P14678	240 aa	Known RBP	13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	ZNF182	P17025	639 aa	Predicted RBP	13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	SCAND1	P57086	179 aa		13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	PLA2G7	Q13093	441 aa		13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	DUX4L9	Q6RFH8	374 aa	Predicted RBP	13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	METAP1D	Q6UB28	335 aa	Predicted RBP	13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	NLRC3	Q7RTR2	1065 aa		13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	LINC00596	Q86U02	117 aa		13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	FAM89B	Q8N5H3	189 aa		13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	FAM216B	Q8N7L0	139 aa		13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	MAPK1IP1L	Q8NDC0	245 aa		13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	OR8B3	Q8NGG8	313 aa		13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	DYNC2LI1	Q8TCX1	351 aa		13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	RAB39B	Q96DA2	213 aa		13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	SNX22	Q96L94	193 aa		13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	OR8B2	Q96RD0	313 aa		13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	TM2D1	Q9BX74	207 aa		13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	LPAR5	Q9H1C0	372 aa		13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	IFT22	Q9H7X7	185 aa		13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	ABRACL	Q9P1F3	81 aa		13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	DUX4	Q9UBX2	424 aa		13.79	□□□□□ -0.2
LTBP3-205	ENST00000526124	FAM90A10P	A6NDY2	464 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	FAM90A18P	A6NE21	464 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	FAM90A16P	A6NEW6	464 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	FAM90A20P	A6NIJ5	464 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	NKX6-3	A6NJ46	265 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	FAM90A8P	A6NJQ4	464 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	FAM90A7P	A6NKC0	464 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	FAM90A22P	A8MWA6	464 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	FAM90A12P	A8MX19	464 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	FAM90A5P	A8MXJ8	464 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	FAM90A23P	A8MXZ1	464 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124		K7N7A8	449 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	FAM90A15P	P0C7V4	464 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	FAM90A13P	P0C7W8	464 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	FAM90A14P	P0C7W9	464 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	FAM90A24P	P0C7X0	464 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	ZNF44	P15621	663 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	RAB6A	P20340	208 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	PITPNB	P48739	271 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	NPY4R	P50391	375 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	EFNB2	P52799	333 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	SEC61A1	P61619	476 aa	Known RBP	13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	MPV17L	Q2QL34	196 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	WDR25	Q64LD2	544 aa	Predicted RBP	13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	C17orf107	Q6ZR85	190 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	OR5D13	Q8NGL4	314 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	OR5H6	Q8NGV6	325 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	KCTD12	Q96CX2	325 aa	Known RBP	13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	URM1	Q9BTM9	101 aa	Known RBP	13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	TMEM59	Q9BXS4	323 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	SHARPIN	Q9H0F6	387 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	CLN8	Q9UBY8	286 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	MED13L	Q71F56	2210 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	CREBBP	Q92793	2442 aa		13.78	□□□□□ -0.2
LTBP3-205	ENST00000526124	TRAV24	A0A0B4J272	114 aa		13.77	□□□□□ -0.21
LTBP3-205	ENST00000526124	TMEM82	A0PJX8	343 aa		13.77	□□□□□ -0.21
LTBP3-205	ENST00000526124	FAM157A	C9JC47	383 aa		13.77	□□□□□ -0.21
LTBP3-205	ENST00000526124	SIRPB1	O00241	398 aa		13.77	□□□□□ -0.21
LTBP3-205	ENST00000526124	SLC33A1	O00400	549 aa	Predicted RBP	13.77	□□□□□ -0.21
LTBP3-205	ENST00000526124	GPR37	O15354	613 aa		13.77	□□□□□ -0.21
LTBP3-205	ENST00000526124	ZNF737	O75373	536 aa		13.77	□□□□□ -0.21
LTBP3-205	ENST00000526124	TK1	P04183	234 aa		13.77	□□□□□ -0.21
LTBP3-205	ENST00000526124	SELL	P14151	372 aa		13.77	□□□□□ -0.21
LTBP3-205	ENST00000526124	IKZF1	Q13422	519 aa		13.77	□□□□□ -0.21
LTBP3-205	ENST00000526124	ESCO2	Q56NI9	601 aa		13.77	□□□□□ -0.21
LTBP3-205	ENST00000526124	LRRC10	Q5BKY1	277 aa		13.77	□□□□□ -0.21
LTBP3-205	ENST00000526124	CHST4	Q8NCG5	386 aa		13.77	□□□□□ -0.21
LTBP3-205	ENST00000526124	ACOT12	Q8WYK0	555 aa		13.77	□□□□□ -0.21
LTBP3-205	ENST00000526124	FAM234A	Q9H0X4	552 aa		13.77	□□□□□ -0.21
LTBP3-205	ENST00000526124	BATF3	Q9NR55	127 aa		13.77	□□□□□ -0.21
LTBP3-205	ENST00000526124	ZNF581	Q9P0T4	197 aa		13.77	□□□□□ -0.21
LTBP3-205	ENST00000526124	SPATA2	Q9UM82	520 aa		13.77	□□□□□ -0.21
LTBP3-205	ENST00000526124		A0A0A6YYD4	124 aa		13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124		H3BUI4	141 aa		13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	SMAD7	O15105	426 aa	Known RBP	13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	PSPN	O60542	156 aa		13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	OR7C1	O76099	320 aa	Predicted RBP	13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	FUT3	P21217	361 aa		13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	GABRR1	P24046	479 aa		13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	ZFP36	P26651	326 aa	Known RBP	13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	SOX6	P35712	828 aa		13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	TMEM50B	P56557	158 aa		13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	GNB2	P62879	340 aa		13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	DYNC1I2	Q13409	638 aa	Known RBP	13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	FAM189A2	Q15884	450 aa		13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	ATAD3C	Q5T2N8	411 aa		13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	FOXB2	Q5VYV0	432 aa		13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	SIGIRR	Q6IA17	410 aa		13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	BIVM	Q86UB2	503 aa		13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	FGFRL1	Q8N441	504 aa		13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	ASCC1	Q8N9N2	400 aa	Known RBP	13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	SUMF2	Q8NBJ7	301 aa		13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	TMEM185A	Q8NFB2	350 aa		13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	OR4S1	Q8NGB4	309 aa		13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	NICN1	Q9BSH3	213 aa		13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	TMUB1	Q9BVT8	246 aa		13.76	□□□□□ -0.21
LTBP3-205	ENST00000526124	SSBP3	Q9BWW4	388 aa	Predicted RBP	13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms