RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 OR8G1Q15617 311 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 CARD17Q5XLA6 110 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 TGIF2Q9GZN2 237 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 ZNF700Q9H0M5 742 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 IL36GQ9NZH8 169 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 DKKL1Q9UK85 242 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 PITPNC1Q9UKF7 332 aa15.41■□□□□ 0.06
NUP54-205ENST00000507257 C3orf85A0A1B0GTC6 90 aa15.4■□□□□ 0.06
NUP54-205ENST00000507257 A0A1B0GV90 55 aa15.4■□□□□ 0.06
NUP54-205ENST00000507257 METTL12A8MUP2 240 aa15.4■□□□□ 0.06
NUP54-205ENST00000507257 SHISA8B8ZZ34 492 aa15.4■□□□□ 0.06
NUP54-205ENST00000507257 SELLP14151 372 aa15.4■□□□□ 0.06
NUP54-205ENST00000507257 GUCA1AP43080 201 aaPredicted RBP15.4■□□□□ 0.06
NUP54-205ENST00000507257 RGS19P49795 217 aa15.4■□□□□ 0.06
NUP54-205ENST00000507257 MTCP1P56278 107 aa15.4■□□□□ 0.06
NUP54-205ENST00000507257 FXYD4P59646 89 aa15.4■□□□□ 0.06
NUP54-205ENST00000507257 HERV-K104P61576 105 aa15.4■□□□□ 0.06
NUP54-205ENST00000507257 CNN3Q15417 329 aaKnown RBP15.4■□□□□ 0.06
NUP54-205ENST00000507257 TAF9Q16594 264 aa15.4■□□□□ 0.06
NUP54-205ENST00000507257 RSPO1Q2MKA7 263 aaPredicted RBP15.4■□□□□ 0.06
NUP54-205ENST00000507257 OR10AD1Q8NGE0 317 aa15.4■□□□□ 0.06
NUP54-205ENST00000507257 FRZBQ92765 325 aa15.4■□□□□ 0.06
NUP54-205ENST00000507257 RHOVQ96L33 236 aa15.4■□□□□ 0.06
NUP54-205ENST00000507257 TP53RKQ96S44 253 aa15.4■□□□□ 0.06
NUP54-205ENST00000507257 SEMA5BQ9P283 1151 aa15.4■□□□□ 0.06
NUP54-205ENST00000507257 SLCO1B1Q9Y6L6 691 aa15.4■□□□□ 0.06
NUP54-205ENST00000507257 A0A087X0M5 115 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 A0A1B0GX30 115 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 ZNF814B7Z6K7 855 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 PROB1E7EW31 1015 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 CLDN34H7C241 214 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 DVL1O14640 695 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 MPPED1O15442 326 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 CYB5R3P00387 301 aaPredicted RBP15.39■□□□□ 0.05
NUP54-205ENST00000507257 RAB4BP61018 213 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 ACSF3Q4G176 576 aaPredicted RBP15.39■□□□□ 0.05
NUP54-205ENST00000507257 AKR1C8PQ5T2L2 129 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 GFI1BQ5VTD9 330 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 TMEM211Q6ICI0 200 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 DTX1Q86Y01 620 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 PRSS58Q8IYP2 241 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 TMEM54Q969K7 222 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 MTIF3Q9H2K0 278 aaKnown RBP15.39■□□□□ 0.05
NUP54-205ENST00000507257 FER1L5A0AVI2 2057 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 CHD9Q3L8U1 2897 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 RALGAPA1Q6GYQ0 2036 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 A0A1B0GU03 582 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 NKX2-6A6NCS4 301 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 F5H5K5 113 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 M0R135 149 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 PTGDSP41222 190 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 NOVA1P51513 510 aaKnown RBP15.39■□□□□ 0.05
NUP54-205ENST00000507257 DMRTC1Q5HYR2 192 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 C16orf47Q6ZP98 133 aaPredicted RBP15.39■□□□□ 0.05
NUP54-205ENST00000507257 Q6ZS49 121 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 LHFPL2Q6ZUX7 228 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 DPPA2Q7Z7J5 298 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 OR5C1Q8NGR4 320 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 SPTSSAQ969W0 71 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 ZNF799Q96GE5 643 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 PACRGQ96M98 296 aaPredicted RBP15.39■□□□□ 0.05
NUP54-205ENST00000507257 JSRP1Q96MG2 331 aaPredicted RBP15.39■□□□□ 0.05
NUP54-205ENST00000507257 CTDSP1Q9GZU7 261 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 CYP8B1Q9UNU6 501 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 URGCP-MRPS24S4R325 110 aa15.39■□□□□ 0.05
NUP54-205ENST00000507257 GEMIN2O14893 280 aaKnown RBP15.38■□□□□ 0.05
NUP54-205ENST00000507257 OPN1MWP04001 364 aa15.38■□□□□ 0.05
NUP54-205ENST00000507257 OPN1MW2P0DN77 364 aa15.38■□□□□ 0.05
NUP54-205ENST00000507257 OPN1MW3P0DN78 364 aa15.38■□□□□ 0.05
NUP54-205ENST00000507257 ARL4DP49703 201 aa15.38■□□□□ 0.05
NUP54-205ENST00000507257 RPL23AP62750 156 aaKnown RBP15.38■□□□□ 0.05
NUP54-205ENST00000507257 VAMP2P63027 116 aa15.38■□□□□ 0.05
NUP54-205ENST00000507257 ID3Q02535 119 aa15.38■□□□□ 0.05
NUP54-205ENST00000507257 IL24Q13007 206 aa15.38■□□□□ 0.05
NUP54-205ENST00000507257 JOSD1Q15040 202 aaPredicted RBP15.38■□□□□ 0.05
NUP54-205ENST00000507257 H1FOOQ8IZA3 346 aaPredicted RBP15.38■□□□□ 0.05
NUP54-205ENST00000507257 LILRB2Q8N423 598 aa15.38■□□□□ 0.05
NUP54-205ENST00000507257 OR11L1Q8NGX0 322 aa15.38■□□□□ 0.05
NUP54-205ENST00000507257 NABP1Q96AH0 204 aa15.38■□□□□ 0.05
NUP54-205ENST00000507257 HIST1H2BLQ99880 126 aa15.38■□□□□ 0.05
NUP54-205ENST00000507257 IGFLR1Q9H665 355 aa15.38■□□□□ 0.05
NUP54-205ENST00000507257 CDH20Q9HBT6 801 aa15.38■□□□□ 0.05
NUP54-205ENST00000507257 GLRX2Q9NS18 164 aa15.38■□□□□ 0.05
NUP54-205ENST00000507257 CISD1Q9NZ45 108 aaKnown RBP15.38■□□□□ 0.05
NUP54-205ENST00000507257 KLRF1Q9NZS2 232 aa15.38■□□□□ 0.05
NUP54-205ENST00000507257 TP53TG5Q9Y2B4 290 aa15.38■□□□□ 0.05
NUP54-205ENST00000507257 SMCO3A2RU48 225 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 C9J4A7 227 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 PPYP01298 95 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 CD63P08962 238 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 RNF224P0DH78 156 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 FABP4P15090 132 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 CD200P41217 278 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 DYNLT3P51808 116 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 TAS2R30P59541 319 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 H3F3AP84243 136 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 FOXO1Q12778 655 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 SHBQ15464 509 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 ZNF124Q15973 351 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 SRSF7Q16629 238 aaKnown RBP eCLIP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms