RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 GSK3BP49841 420 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 IL5RAQ01344 420 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 PGGHGQ32M88 737 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 DHRS4L2Q6PKH6 230 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 COMMD2Q86X83 199 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 OR5M9Q8NGP3 310 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 OR13D1Q8NGV5 346 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 RAB8BQ92930 207 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 YIPF5Q969M3 257 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 OR7D2Q96RA2 312 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 SDHCQ99643 169 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-205ENST00000485055 SLC6A7Q99884 636 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 MRPS26Q9BYN8 205 aaKnown RBP4.46□□□□□ -1.7
CCDC39-205ENST00000485055 SDR39U1Q9NRG7 319 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-205ENST00000485055 IMPAD1Q9NX62 359 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 FLRT3Q9NZU0 649 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 SLAMF8Q9P0V8 285 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 BOD1L1Q8NFC6 3051 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 FBN2P35556 2912 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 TRBV5-3A0A0A0MS03 114 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 FAM231BA6NCW3 169 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 C16orf97H3BN30 126 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 NPIPB7O75200 414 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 GPANK1O95872 356 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 HMGN2P05204 90 aaKnown RBP4.46□□□□□ -1.7
CCDC39-205ENST00000485055 LAMP1P11279 417 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 HOXB4P17483 251 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-205ENST00000485055 HTR1FP30939 366 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 OR3A3P47888 321 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 ZNF121P58317 390 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-205ENST00000485055 MRPS11P82912 194 aaKnown RBP4.46□□□□□ -1.7
CCDC39-205ENST00000485055 ZNF117Q03924 483 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 HGFACQ04756 655 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 FOXF2Q12947 444 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 HAGHQ16775 308 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 ATP6V1FQ16864 119 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 ODF4Q2M2E3 257 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 AKIRIN2Q53H80 203 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 RNASE12Q5GAN4 147 aaKnown RBP4.46□□□□□ -1.7
CCDC39-205ENST00000485055 NCMAPQ5T1S8 102 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 TYW3Q6IPR3 259 aaKnown RBP4.46□□□□□ -1.7
CCDC39-205ENST00000485055 TFAP2EQ6VUC0 442 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 Q6ZT83 130 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 SSX7Q7RTT5 188 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 NET1Q7Z628 596 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-205ENST00000485055 MARCH3Q86UD3 253 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 OR4F17Q8NGA8 305 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 OR52N4Q8NGI2 321 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 OR4F5Q8NH21 305 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 OR4C3Q8NH37 302 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 FGFBP3Q8TAT2 258 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 OR4F4Q96R69 305 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 TBX5Q99593 518 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 METTL17Q9H7H0 456 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-205ENST00000485055 SLC25A19Q9HC21 320 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 A4GALTQ9NPC4 353 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 ZNF391Q9UJN7 358 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 MCTS1Q9ULC4 181 aaKnown RBP4.46□□□□□ -1.7
CCDC39-205ENST00000485055 MGAT4AQ9UM21 535 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 AK6Q9Y3D8 172 aaKnown RBP4.46□□□□□ -1.7
CCDC39-205ENST00000485055 NINQ8N4C6 2090 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 A0A0J9YW62 118 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 MYOCOSA0A1B0GUC4 107 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 SLC22A23A1A5C7 686 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 FAM90A26D6RGX4 464 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 SLC1A7O00341 560 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 HPGDSO60760 199 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 UGT2B17O75795 530 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 KRT33AO76009 404 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 TCL1AP56279 114 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 FUT5Q11128 374 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 RPL13AP3Q6NVV1 102 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 SLC30A8Q8IWU4 369 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 ABHD12Q8N2K0 398 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 PAQR4Q8N4S7 273 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-205ENST00000485055 CLDN22Q8N7P3 220 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 HSD17B11Q8NBQ5 300 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 RORBQ92753 470 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 FAM46AQ96IP4 442 aaKnown RBP4.45□□□□□ -1.7
CCDC39-205ENST00000485055 TBL1XR1Q9BZK7 514 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 ZNF385DQ9H6B1 395 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 AKTIPQ9H8T0 292 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 FKRPQ9H9S5 495 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 KCNE5Q9UJ90 142 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 VPREB3Q9UKI3 123 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 RAB26Q9ULW5 256 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 PROCRQ9UNN8 238 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 SMIM9A6NGZ8 99 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 CDC14BO60729 498 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 MPDU1O75352 247 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 TRAPPC6AO75865 159 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 TSPAN19P0C672 248 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 LINC00032P0C843 101 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 FUT3P21217 361 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 PPIBP23284 216 aaKnown RBP4.45□□□□□ -1.7
CCDC39-205ENST00000485055 CLDN20P56880 219 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 DSCR9P59020 149 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 RPL38P63173 70 aaKnown RBP4.45□□□□□ -1.7
CCDC39-205ENST00000485055 HBA1P69905 142 aa4.45□□□□□ -1.7
CCDC39-205ENST00000485055 ASAH1Q13510 395 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms