RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 NKX2-6A6NCS4 301 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 ZNF814B7Z6K7 855 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 PHOX2AO14813 284 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 TRGC1P0CF51 173 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 SELLP14151 372 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 PNLIPP16233 465 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 FKBP2P26885 142 aaKnown RBP6.33□□□□□ -1.4
USP48-206ENST00000464577 OPRM1P35372 400 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 CEACAM6P40199 344 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 PTGDSP41222 190 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 ARL4DP49703 201 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 RGS19P49795 217 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 RRADP55042 308 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 MTCP1P56278 107 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 CNN3Q15417 329 aaKnown RBP6.33□□□□□ -1.4
USP48-206ENST00000464577 OR8G1Q15617 311 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 EXT1Q16394 746 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 TAF9Q16594 264 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 AKR1C8PQ5T2L2 129 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 C16orf47Q6ZP98 133 aaPredicted RBP6.33□□□□□ -1.4
USP48-206ENST00000464577 DTX1Q86Y01 620 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 ZNF100Q8IYN0 542 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 OR10AD1Q8NGE0 317 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 LMX1AQ8TE12 382 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 TMEM54Q969K7 222 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 JSRP1Q96MG2 331 aaPredicted RBP6.33□□□□□ -1.4
USP48-206ENST00000464577 TP53RKQ96S44 253 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 TGIF2Q9GZN2 237 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 TMEM222Q9H0R3 208 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 IGFLR1Q9H665 355 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 KLRF1Q9NZS2 232 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 PIAS3Q9Y6X2 628 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 TRBV24-1A0A075B6N3 115 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 A0A087X0M5 115 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 A0A1B0GX30 115 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 CLDN34H7C241 214 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 M0R135 149 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 GEMIN2O14893 280 aaKnown RBP6.32□□□□□ -1.4
USP48-206ENST00000464577 MPPED1O15442 326 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 CYB5R3P00387 301 aaPredicted RBP6.32□□□□□ -1.4
USP48-206ENST00000464577 RNF224P0DH78 156 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 FOLR1P15328 257 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 AADACP22760 399 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 GUCA1AP43080 201 aaPredicted RBP6.32□□□□□ -1.4
USP48-206ENST00000464577 ASCL1P50553 236 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 NOVA1P51513 510 aaKnown RBP6.32□□□□□ -1.4
USP48-206ENST00000464577 TAS2R30P59541 319 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 RAB4BP61018 213 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 RPL23AP62750 156 aaKnown RBP6.32□□□□□ -1.4
USP48-206ENST00000464577 VAMP2P63027 116 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 IL24Q13007 206 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 RSPO1Q2MKA7 263 aaPredicted RBP6.32□□□□□ -1.4
USP48-206ENST00000464577 DMRTC1Q5HYR2 192 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 GFI1BQ5VTD9 330 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 LHFPL2Q6ZUX7 228 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 DPPA2Q7Z7J5 298 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 LILRB2Q8N423 598 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 OR11L1Q8NGX0 322 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 RNASEH2CQ8TDP1 164 aaKnown RBP6.32□□□□□ -1.4
USP48-206ENST00000464577 ABHD5Q8WTS1 349 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 FRZBQ92765 325 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 SPTSSAQ969W0 71 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 NABP1Q96AH0 204 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 ZNF799Q96GE5 643 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 PACRGQ96M98 296 aaPredicted RBP6.32□□□□□ -1.4
USP48-206ENST00000464577 GLRX2Q9NS18 164 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 GPR173Q9NS66 373 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 SEMA5BQ9P283 1151 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 PITPNC1Q9UKF7 332 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 CYP8B1Q9UNU6 501 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 SLCO1B1Q9Y6L6 691 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 URGCP-MRPS24S4R325 110 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 IGHV3-20A0A0C4DH32 117 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 A0A1B0GU03 582 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 A0A1W2PNR3 127 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 SMCO3A2RU48 225 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 PROB1E7EW31 1015 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 F5H5K5 113 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 DVL1O14640 695 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 DFFBO76075 338 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 PPYP01298 95 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 FABP4P15090 132 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 FGF7P21781 194 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 CD200P41217 278 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 VEGFBP49765 207 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 DYNLT3P51808 116 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 CEBPGP53567 150 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 H3F3AP84243 136 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 SHBQ15464 509 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 ACSF3Q4G176 576 aaPredicted RBP6.32□□□□□ -1.4
USP48-206ENST00000464577 C1orf189Q5VU69 101 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 FAM90A2PQ658T7 463 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 TMEM211Q6ICI0 200 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 MEX3BQ6ZN04 569 aaKnown RBP6.32□□□□□ -1.4
USP48-206ENST00000464577 Q6ZS49 121 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 ANKRD37Q7Z713 158 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 ODF3L1Q8IXM7 274 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 CMTM1Q8IZ96 169 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 OR2M3Q8NG83 312 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 OR5C1Q8NGR4 320 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms