RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859		E9PI62	339 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	EBAG9	O00559	213 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	CHST1	O43916	411 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	PSPN	O60542	156 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	CLPX	O76031	633 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	ISG15	P05161	165 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	IGHV1-8	P0DP01	117 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	JUNB	P17275	347 aa	Predicted RBP	7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	GABRB1	P18505	474 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	PRKACB	P22694	351 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	PEX2	P28328	305 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	RAB13	P51153	203 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	GP2	P55259	537 aa	Known RBP	7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	DEFA6	Q01524	100 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	SSX2	Q16385	188 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	ASPHD2	Q6ICH7	369 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	FDX2	Q6P4F2	183 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	UTS2B	Q765I0	119 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	TCF23	Q7RTU1	214 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	KCTD20	Q7Z5Y7	419 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	TMEM219	Q86XT9	240 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859		Q8IYB0	196 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	DNAAF1	Q8NEP3	725 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	OR4S1	Q8NGB4	309 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	OR52I1	Q8NGK6	324 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	OR4C13	Q8NGP0	309 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	OR13D1	Q8NGV5	346 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	PPP1R35	Q8TAP8	253 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	SPSB1	Q96BD6	273 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	C10orf35	Q96D05	121 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	SNX22	Q96L94	193 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	PDCD1LG2	Q9BQ51	273 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	C16orf95	Q9H693	158 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	EXOSC4	Q9NPD3	245 aa	Known RBP	7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	ABCB10	Q9NRK6	738 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	ERVK13-1	Q9NX77	482 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	GLS2	Q9UI32	602 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	FOXJ3	Q9UPW0	622 aa		7.03	□□□□□ -1.28
RFX3-209	ENST00000451859	IGKV1-12	A0A0C4DH73	117 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	hADV38S2	A0JD32	116 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	C17orf98	A8MV24	154 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859		E9PQ18	207 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	HSPB6	O14558	160 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	TSPAN9	O75954	239 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	FADS2	O95864	444 aa	Known RBP	7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	OR2H2	O95918	312 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	IGKV1D-12	P01611	117 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	VSIG10L2	P0DP72	767 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	ZNF44	P15621	663 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	OR3A1	P47881	315 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	SOX2	P48431	317 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	CCR9	P51686	369 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	GBX2	P52951	348 aa	Predicted RBP	7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	PDZK1IP1	Q13113	114 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	IL18R1	Q13478	541 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	GALE	Q14376	348 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	HABP2	Q14520	560 aa	Predicted RBP	7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	SMN1	Q16637	294 aa	Known RBP	7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	ZSCAN26	Q16670	478 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	LRRC36	Q1X8D7	754 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	SLC25A30	Q5SVS4	291 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	LDLRAD2	Q5SZI1	272 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	PRAMEF5	Q5TYX0	476 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	SATL1	Q86VE3	508 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	C10orf67	Q8IYJ2	551 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	KLHDC1	Q8N7A1	406 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	ZNF555	Q8NEP9	628 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	FAM110D	Q8TAY7	271 aa	Predicted RBP	7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	NDNF	Q8TB73	568 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	APH1B	Q8WW43	257 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	STMN2	Q93045	179 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859		Q96MT0	163 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	NR1H4	Q96RI1	486 aa	Predicted RBP	7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	FAM192A	Q9GZU8	254 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	COMMD4	Q9H0A8	199 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	MEGF9	Q9H1U4	602 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	ZCCHC4	Q9H5U6	513 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	HMG20A	Q9NP66	347 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	FAM118A	Q9NWS6	357 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	DHDH	Q9UQ10	334 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	HILPDA	Q9Y5L2	63 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	TG	P01266	2768 aa		7.02	□□□□□ -1.29
RFX3-209	ENST00000451859	IGHV2-26	A0A0B4J1V2	119 aa		7.01	□□□□□ -1.29
RFX3-209	ENST00000451859	TMEM212	A6NML5	194 aa		7.01	□□□□□ -1.29
RFX3-209	ENST00000451859	ODF3B	A8MYP8	253 aa		7.01	□□□□□ -1.29
RFX3-209	ENST00000451859	F2RL2	O00254	374 aa		7.01	□□□□□ -1.29
RFX3-209	ENST00000451859	SH2D1B	O14796	132 aa		7.01	□□□□□ -1.29
RFX3-209	ENST00000451859	MGST3	O14880	152 aa		7.01	□□□□□ -1.29
RFX3-209	ENST00000451859	MPZL2	O60487	215 aa		7.01	□□□□□ -1.29
RFX3-209	ENST00000451859	MMP23A	O75900	390 aa		7.01	□□□□□ -1.29
RFX3-209	ENST00000451859	ZFPL1	O95159	310 aa		7.01	□□□□□ -1.29
RFX3-209	ENST00000451859	CLIC3	O95833	236 aa		7.01	□□□□□ -1.29
RFX3-209	ENST00000451859	TMEM225B	P0DP42	221 aa		7.01	□□□□□ -1.29
RFX3-209	ENST00000451859	GTF2A1	P52655	376 aa	Predicted RBP	7.01	□□□□□ -1.29
RFX3-209	ENST00000451859	P2RX3	P56373	397 aa		7.01	□□□□□ -1.29
RFX3-209	ENST00000451859	SLC34A1	Q06495	639 aa		7.01	□□□□□ -1.29
RFX3-209	ENST00000451859	AES	Q08117	197 aa		7.01	□□□□□ -1.29
RFX3-209	ENST00000451859	RAB40B	Q12829	278 aa		7.01	□□□□□ -1.29
RFX3-209	ENST00000451859	ATXN7L3	Q14CW9	347 aa	Predicted RBP	7.01	□□□□□ -1.29
RFX3-209	ENST00000451859	SPIN3	Q5JUX0	258 aa		7.01	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms