RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 IKZF1Q13422 519 aa20.22■□□□□ 0.83
HMGA2-201ENST00000354636 CNPY1Q3B7I2 92 aa20.22■□□□□ 0.83
HMGA2-201ENST00000354636 GAFA1Q96PS6 74 aa20.22■□□□□ 0.83
HMGA2-201ENST00000354636 IFT22Q9H7X7 185 aa20.22■□□□□ 0.83
HMGA2-201ENST00000354636 RHBDL2Q9NX52 303 aa20.22■□□□□ 0.83
HMGA2-201ENST00000354636 METRNQ9UJH8 293 aa20.22■□□□□ 0.83
HMGA2-201ENST00000354636 PCDHB10Q9UN67 800 aa20.22■□□□□ 0.83
HMGA2-201ENST00000354636 DEGS1O15121 323 aa20.21■□□□□ 0.83
HMGA2-201ENST00000354636 TMPRSS2O15393 492 aa20.21■□□□□ 0.83
HMGA2-201ENST00000354636 OR7C1O76099 320 aaPredicted RBP20.21■□□□□ 0.83
HMGA2-201ENST00000354636 GABRR1P24046 479 aa20.21■□□□□ 0.83
HMGA2-201ENST00000354636 SCN1BQ07699 218 aa20.21■□□□□ 0.83
HMGA2-201ENST00000354636 FAM189A2Q15884 450 aa20.21■□□□□ 0.83
HMGA2-201ENST00000354636 SIGIRRQ6IA17 410 aa20.21■□□□□ 0.83
HMGA2-201ENST00000354636 SLC36A1Q7Z2H8 476 aa20.21■□□□□ 0.83
HMGA2-201ENST00000354636 SAMD12Q8N8I0 201 aa20.21■□□□□ 0.83
HMGA2-201ENST00000354636 MCFD2Q8NI22 146 aa20.21■□□□□ 0.83
HMGA2-201ENST00000354636 CMTM3Q96MX0 182 aa20.21■□□□□ 0.83
HMGA2-201ENST00000354636 MAP1AP78559 2803 aaPredicted RBP20.21■□□□□ 0.83
HMGA2-201ENST00000354636 A0A1B0GW55 424 aa20.2■□□□□ 0.82
HMGA2-201ENST00000354636 SIGLEC5O15389 551 aa20.2■□□□□ 0.82
HMGA2-201ENST00000354636 ADAM20O43506 726 aa20.2■□□□□ 0.82
HMGA2-201ENST00000354636 DUX4L2P0CJ85 424 aa20.2■□□□□ 0.82
HMGA2-201ENST00000354636 DUX4L3P0CJ86 424 aa20.2■□□□□ 0.82
HMGA2-201ENST00000354636 DUX4L4P0CJ87 422 aa20.2■□□□□ 0.82
HMGA2-201ENST00000354636 DUX4L5P0CJ88 424 aa20.2■□□□□ 0.82
HMGA2-201ENST00000354636 DUX4L6P0CJ89 424 aa20.2■□□□□ 0.82
HMGA2-201ENST00000354636 DUX4L7P0CJ90 424 aa20.2■□□□□ 0.82
HMGA2-201ENST00000354636 ZNF44P15621 663 aa20.2■□□□□ 0.82
HMGA2-201ENST00000354636 COL10A1Q03692 680 aa20.2■□□□□ 0.82
HMGA2-201ENST00000354636 DUX4L9Q6RFH8 374 aaPredicted RBP20.2■□□□□ 0.82
HMGA2-201ENST00000354636 ZNF561Q8N587 486 aa20.2■□□□□ 0.82
HMGA2-201ENST00000354636 WFDC11Q8NEX6 87 aa20.2■□□□□ 0.82
HMGA2-201ENST00000354636 ATG5Q9H1Y0 275 aa20.2■□□□□ 0.82
HMGA2-201ENST00000354636 ABCG5Q9H222 651 aa20.2■□□□□ 0.82
HMGA2-201ENST00000354636 PATZ1Q9HBE1 687 aaKnown RBP20.2■□□□□ 0.82
HMGA2-201ENST00000354636 CTSZQ9UBR2 303 aa20.2■□□□□ 0.82
HMGA2-201ENST00000354636 DUX4Q9UBX2 424 aa20.2■□□□□ 0.82
HMGA2-201ENST00000354636 MIOXQ9UGB7 285 aa20.2■□□□□ 0.82
HMGA2-201ENST00000354636 A3GALT2U3KPV4 340 aa20.2■□□□□ 0.82
HMGA2-201ENST00000354636 IGHV4-61A0A0C4DH41 118 aa20.19■□□□□ 0.82
HMGA2-201ENST00000354636 METTL21EPA6NDL7 271 aa20.19■□□□□ 0.82
HMGA2-201ENST00000354636 NKX6-3A6NJ46 265 aa20.19■□□□□ 0.82
HMGA2-201ENST00000354636 FOXI3A8MTJ6 420 aaPredicted RBP20.19■□□□□ 0.82
HMGA2-201ENST00000354636 CTDSP2O14595 271 aa20.19■□□□□ 0.82
HMGA2-201ENST00000354636 WNT2P09544 360 aa20.19■□□□□ 0.82
HMGA2-201ENST00000354636 VEGFCP49767 419 aa20.19■□□□□ 0.82
HMGA2-201ENST00000354636 IL13RA1P78552 427 aa20.19■□□□□ 0.82
HMGA2-201ENST00000354636 UBE2NLQ5JXB2 153 aa20.19■□□□□ 0.82
HMGA2-201ENST00000354636 FAM216BQ8N7L0 139 aa20.19■□□□□ 0.82
HMGA2-201ENST00000354636 CHST4Q8NCG5 386 aa20.19■□□□□ 0.82
HMGA2-201ENST00000354636 ZNRF1Q8ND25 227 aa20.19■□□□□ 0.82
HMGA2-201ENST00000354636 CLDND2Q8NHS1 167 aa20.19■□□□□ 0.82
HMGA2-201ENST00000354636 MED30Q96HR3 178 aa20.19■□□□□ 0.82
HMGA2-201ENST00000354636 RCC2Q9P258 522 aaKnown RBP20.19■□□□□ 0.82
HMGA2-201ENST00000354636 TRAV24A0A0B4J272 114 aa20.18■□□□□ 0.82
HMGA2-201ENST00000354636 F5H0A9 414 aaPredicted RBP20.18■□□□□ 0.82
HMGA2-201ENST00000354636 RAB27BO00194 218 aa20.18■□□□□ 0.82
HMGA2-201ENST00000354636 SIRPB1O00241 398 aa20.18■□□□□ 0.82
HMGA2-201ENST00000354636 SLC33A1O00400 549 aaPredicted RBP20.18■□□□□ 0.82
HMGA2-201ENST00000354636 SOCS1O15524 211 aa20.18■□□□□ 0.82
HMGA2-201ENST00000354636 PSPNO60542 156 aa20.18■□□□□ 0.82
HMGA2-201ENST00000354636 HPGDSO60760 199 aa20.18■□□□□ 0.82
HMGA2-201ENST00000354636 ZNF737O75373 536 aa20.18■□□□□ 0.82
HMGA2-201ENST00000354636 RPS2P15880 293 aaKnown RBP20.18■□□□□ 0.82
HMGA2-201ENST00000354636 PITPNBP48739 271 aa20.18■□□□□ 0.82
HMGA2-201ENST00000354636 CMTM4Q8IZR5 234 aa20.18■□□□□ 0.82
HMGA2-201ENST00000354636 OR56B1Q8NGI3 324 aa20.18■□□□□ 0.82
HMGA2-201ENST00000354636 MMP27Q9H306 513 aa20.18■□□□□ 0.82
HMGA2-201ENST00000354636 A0A096LNT2 108 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 TMEM82A0PJX8 343 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 IGHV2-5P01817 119 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 APOA1P02647 267 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 SELLP14151 372 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 BLVRBP30043 206 aaPredicted RBP20.17■□□□□ 0.82
HMGA2-201ENST00000354636 TMEM50BP56557 158 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 LMO4P61968 165 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 MOGAT2Q3SYC2 334 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 C17orf107Q6ZR85 190 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 RAB40AQ8WXH6 277 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 NEIL1Q96FI4 390 aaPredicted RBP20.17■□□□□ 0.82
HMGA2-201ENST00000354636 C6orf62Q9GZU0 229 aaPredicted RBP20.17■□□□□ 0.82
HMGA2-201ENST00000354636 SHARPINQ9H0F6 387 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 SPACA1Q9HBV2 294 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 RNF223E7ERA6 249 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 H3BUI4 141 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 K7N7A8 449 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 RGS5O15539 181 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 PDCD6O75340 191 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 FCN3O75636 299 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 EIF4EP06730 217 aaKnown RBP20.17■□□□□ 0.82
HMGA2-201ENST00000354636 FUT3P21217 361 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 USF1P22415 310 aaPredicted RBP20.17■□□□□ 0.82
HMGA2-201ENST00000354636 CHATP28329 748 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 ATAD3CQ5T2N8 411 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 ZNF841Q6ZN19 808 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 ASCC1Q8N9N2 400 aaKnown RBP20.17■□□□□ 0.82
HMGA2-201ENST00000354636 SNX22Q96L94 193 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 MIXL1Q9H2W2 232 aa20.17■□□□□ 0.82
HMGA2-201ENST00000354636 TK1P04183 234 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms