RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Rassf1Q99MK9 340 aa18.34■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 NepnQ9CQ76 512 aa18.34■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Rtl8bQ9D1F0 113 aa18.34■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Batf3Q9D275 118 aa18.34■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 Vmn1r41Q9EQ44 310 aa18.34■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 RhouQ9EQT3 261 aa18.34■□□□□ 0.53
Ccdc88a-202ENSMUST00000109477 B3gat2P59270 324 aa18.33■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Olfr1428Q0VDY1 314 aa18.33■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 1700001J03RikQ80ZR8 219 aa18.33■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Vmn1r192Q8K4C9 300 aa18.33■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Olfr291Q8VF60 317 aa18.33■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Olfr1110Q8VG38 312 aa18.33■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Q9D8N1 392 aa18.33■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 ApooQ9DCZ4 198 aa18.33■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Jmjd1cQ69ZK6 2350 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Gm5519D3Z175 170 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Nipsnap1O55125 284 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Abcd4O89016 606 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 PrkacbP68181 351 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Lgals3bpQ07797 577 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Hhipl1Q14DK5 791 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Gm11110Q3U4K9 109 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Ppp5cQ60676 499 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Pafah1b3Q61205 232 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Vstm2lQ6PDS0 220 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Oxa1lQ8BGA9 433 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Vash2Q8C5G2 355 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Dcbld1Q9D4J3 503 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Olfr27Q9EQ90 311 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Elp4Q9ER73 422 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Stard10Q9JMD3 291 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 MvkQ9R008 395 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 S1pr3Q9Z0U9 378 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Vmn2r107E9PZJ7 861 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Gm21783J3QM57 227 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 OmgQ63912 440 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Kiaa1456Q80WQ4 447 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Gm5447Q8BPB2 115 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Gpr89aQ8BS95 455 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Olfr168Q8VF05 312 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Olfr800Q8VFH7 311 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Q9CR55 154 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 1700034E13RikQ9D2T6 108 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Olfr894Q9EQB2 313 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Gpr37Q9QY42 600 aa18.32■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Lama5Q61001 3718 aa18.31■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Tmem201A2A8U2 664 aa18.31■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Gm8020F6WLE9 229 aa18.31■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Gm12830F6XVH0 157 aa18.31■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Stfa3P35173 103 aa18.31■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 CtdsplP58465 276 aa18.31■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Selenbp2Q63836 472 aa18.31■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Slc1a7Q8JZR4 559 aa18.31■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Scgb2b27Q8R1E9 112 aa18.31■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Adarb1Q91ZS8 711 aaKnown RBP18.31■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Olfr225E9PWF9 419 aa18.3■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Il4P07750 140 aa18.3■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Tcl1b1P56840 116 aa18.3■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Gpr173Q6PI62 373 aa18.3■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Phf21aQ6ZPK0 659 aa18.3■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Igsf21Q7TNR6 468 aa18.3■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Olfr479Q7TRV1 327 aa18.3■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Map6Q7TSJ2 906 aa18.3■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Rell2Q8BRJ3 303 aa18.3■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Dhrs7cQ8CHS7 311 aa18.3■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 MetrnlQ8VE43 311 aa18.3■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Olfr734Q8VFT4 313 aa18.3■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Cyyr1Q8VIH7 165 aa18.3■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Sgo1Q9CXH7 517 aa18.3■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 SdhcQ9CZB0 169 aaKnown RBP18.3■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Mrps30Q9D0G0 442 aaKnown RBP18.3■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Tomm20Q9DCC8 145 aa18.3■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Ptpn13Q64512 2453 aa18.3■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Olfr1337A2ACY8 315 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Gm4175D3YTW8 314 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Gm8229K7N749 213 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Olfr1218L7MU54 311 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 P04946 108 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Pax9P47242 342 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Anxa11P97384 503 aaKnown RBP18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Coq7P97478 217 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Adra2aQ01338 450 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Pip4p1Q3TWL2 284 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 XkrxQ5GH68 449 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Tcf15Q60756 195 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Olfr1216Q7TR05 311 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Clvs2Q8BG92 327 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Olfr1459Q8VFV9 307 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 PecrQ99MZ7 303 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 D17h6s53eQ9Z1R4 293 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Gm28897A0A087WP44 222 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 D7Ertd443eD2J0Y4 644 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Vmn1r174E9PYW5 313 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Ms4a18J3QN01 344 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Gm6401L7N2C0 213 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Dkk1O54908 272 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Ntf3P20181 258 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Wnt5aP22725 380 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Rab6aP35279 208 aaKnown RBP18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Idh3gP70404 393 aa18.29■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms