RNA–Protein interactions for RNA: ENST00000614051.1

CCL3-206, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CCL3, Length 1,494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-206ENST00000614051 SCN1BQ07699 218 aa13.03□□□□□ -0.32
CCL3-206ENST00000614051 CNIH2Q6PI25 160 aa13.03□□□□□ -0.32
CCL3-206ENST00000614051 CDH24Q86UP0 819 aa13.03□□□□□ -0.32
CCL3-206ENST00000614051 OR4M1Q8NGD0 313 aa13.03□□□□□ -0.32
CCL3-206ENST00000614051 PERPQ96FX8 193 aa13.03□□□□□ -0.32
CCL3-206ENST00000614051 TM2D1Q9BX74 207 aa13.03□□□□□ -0.32
CCL3-206ENST00000614051 ABCG5Q9H222 651 aa13.03□□□□□ -0.32
CCL3-206ENST00000614051 RHOFQ9HBH0 211 aa13.03□□□□□ -0.32
CCL3-206ENST00000614051 ZNF701Q9NV72 531 aaPredicted RBP13.03□□□□□ -0.32
CCL3-206ENST00000614051 RASL12Q9NYN1 266 aa13.03□□□□□ -0.32
CCL3-206ENST00000614051 DNAJB11Q9UBS4 358 aa13.03□□□□□ -0.32
CCL3-206ENST00000614051 NPTNQ9Y639 398 aa13.03□□□□□ -0.32
CCL3-206ENST00000614051 RFPL4AA6NLU0 287 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 RFPL4AL1F8VTS6 287 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 IFNL4K9M1U5 179 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 CDK2P24941 298 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 S100A5P33763 92 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 PITPNBP48739 271 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 PTH2RP49190 550 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 ATP5J2P56134 94 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 SMIM21Q3B7S5 101 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 AVPI1Q5T686 147 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 SIGIRRQ6IA17 410 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 BRICD5Q6PL45 260 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 LRRC28Q86X40 367 aaPredicted RBP13.02□□□□□ -0.33
CCL3-206ENST00000614051 FAM90A1Q86YD7 464 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 C1orf87Q8N0U7 546 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 FAM89BQ8N5H3 189 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 ZNF525Q8N782 197 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 MRPS24Q96EL2 167 aaKnown RBP13.02□□□□□ -0.33
CCL3-206ENST00000614051 DIRAS2Q96HU8 199 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 URM1Q9BTM9 101 aaKnown RBP13.02□□□□□ -0.33
CCL3-206ENST00000614051 DLL4Q9NR61 685 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 NLKQ9UBE8 527 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 EXTL2Q9UBQ6 330 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 WIPI2Q9Y4P8 454 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 ARID1AO14497 2285 aa13.02□□□□□ -0.33
CCL3-206ENST00000614051 IGKV1D-17A0A075B6S4 117 aa13.01□□□□□ -0.33
CCL3-206ENST00000614051 PPIAL4EA0A075B759 164 aa13.01□□□□□ -0.33
CCL3-206ENST00000614051 OOEPA6NGQ2 149 aa13.01□□□□□ -0.33
CCL3-206ENST00000614051 OR2AT4A6NND4 320 aa13.01□□□□□ -0.33
CCL3-206ENST00000614051 PPIAL4DF5H284 164 aa13.01□□□□□ -0.33
CCL3-206ENST00000614051 RAB27BO00194 218 aa13.01□□□□□ -0.33
CCL3-206ENST00000614051 KNG1P01042 644 aa13.01□□□□□ -0.33
CCL3-206ENST00000614051 GYPAP02724 150 aa13.01□□□□□ -0.33
CCL3-206ENST00000614051 PPIAL4FP0DN26 164 aa13.01□□□□□ -0.33
CCL3-206ENST00000614051 PSG2P11465 335 aa13.01□□□□□ -0.33
CCL3-206ENST00000614051 TMEM50BP56557 158 aa13.01□□□□□ -0.33
CCL3-206ENST00000614051 MRPS11P82912 194 aaKnown RBP13.01□□□□□ -0.33
CCL3-206ENST00000614051 IKZF1Q13422 519 aa13.01□□□□□ -0.33
CCL3-206ENST00000614051 ZMYND11Q15326 602 aa13.01□□□□□ -0.33
CCL3-206ENST00000614051 NHLRC3Q5JS37 347 aa13.01□□□□□ -0.33
CCL3-206ENST00000614051 Q6P435 159 aa13.01□□□□□ -0.33
CCL3-206ENST00000614051 CD177Q8N6Q3 437 aa13.01□□□□□ -0.33
CCL3-206ENST00000614051 RAB40AQ8WXH6 277 aa13.01□□□□□ -0.33
CCL3-206ENST00000614051 S100A16Q96FQ6 103 aaKnown RBP13.01□□□□□ -0.33
CCL3-206ENST00000614051 CMTM3Q96MX0 182 aa13.01□□□□□ -0.33
CCL3-206ENST00000614051 PPIAL4AQ9Y536 164 aa13.01□□□□□ -0.33
CCL3-206ENST00000614051 METTL21EPA6NDL7 271 aa13□□□□□ -0.33
CCL3-206ENST00000614051 FOXI3A8MTJ6 420 aaPredicted RBP13□□□□□ -0.33
CCL3-206ENST00000614051 CLDN25C9JDP6 229 aa13□□□□□ -0.33
CCL3-206ENST00000614051 LGALS8O00214 317 aa13□□□□□ -0.33
CCL3-206ENST00000614051 SIRPB1O00241 398 aa13□□□□□ -0.33
CCL3-206ENST00000614051 PPIHO43447 177 aaKnown RBP13□□□□□ -0.33
CCL3-206ENST00000614051 OR7C1O76099 320 aaPredicted RBP13□□□□□ -0.33
CCL3-206ENST00000614051 HAND1O96004 215 aa13□□□□□ -0.33
CCL3-206ENST00000614051 AMY2BP19961 511 aa13□□□□□ -0.33
CCL3-206ENST00000614051 CPT2P23786 658 aa13□□□□□ -0.33
CCL3-206ENST00000614051 BLVRBP30043 206 aaPredicted RBP13□□□□□ -0.33
CCL3-206ENST00000614051 GABRA2P47869 451 aa13□□□□□ -0.33
CCL3-206ENST00000614051 BTG1P62324 171 aa13□□□□□ -0.33
CCL3-206ENST00000614051 IL13RA2Q14627 380 aa13□□□□□ -0.33
CCL3-206ENST00000614051 ZNF146Q15072 292 aa13□□□□□ -0.33
CCL3-206ENST00000614051 MICBQ29980 383 aa13□□□□□ -0.33
CCL3-206ENST00000614051 TEX36Q5VZQ5 186 aa13□□□□□ -0.33
CCL3-206ENST00000614051 CHST4Q8NCG5 386 aa13□□□□□ -0.33
CCL3-206ENST00000614051 OR10R2Q8NGX6 335 aa13□□□□□ -0.33
CCL3-206ENST00000614051 WDFY2Q96P53 400 aa13□□□□□ -0.33
CCL3-206ENST00000614051 CHODLQ9H9P2 273 aa13□□□□□ -0.33
CCL3-206ENST00000614051 ZMAT3Q9HA38 289 aaKnown RBP13□□□□□ -0.33
CCL3-206ENST00000614051 ADAM30Q9UKF2 790 aa13□□□□□ -0.33
CCL3-206ENST00000614051 TRAV18A0A075B6X5 111 aa12.99□□□□□ -0.33
CCL3-206ENST00000614051 A0A1B0GW55 424 aa12.99□□□□□ -0.33
CCL3-206ENST00000614051 HSPB6O14558 160 aa12.99□□□□□ -0.33
CCL3-206ENST00000614051 DEGS1O15121 323 aa12.99□□□□□ -0.33
CCL3-206ENST00000614051 OR2H2O95918 312 aa12.99□□□□□ -0.33
CCL3-206ENST00000614051 DUX4L2P0CJ85 424 aa12.99□□□□□ -0.33
CCL3-206ENST00000614051 DUX4L3P0CJ86 424 aa12.99□□□□□ -0.33
CCL3-206ENST00000614051 DUX4L4P0CJ87 422 aa12.99□□□□□ -0.33
CCL3-206ENST00000614051 DUX4L5P0CJ88 424 aa12.99□□□□□ -0.33
CCL3-206ENST00000614051 DUX4L6P0CJ89 424 aa12.99□□□□□ -0.33
CCL3-206ENST00000614051 DUX4L7P0CJ90 424 aa12.99□□□□□ -0.33
CCL3-206ENST00000614051 PTHLHP12272 177 aa12.99□□□□□ -0.33
CCL3-206ENST00000614051 ZNF44P15621 663 aa12.99□□□□□ -0.33
CCL3-206ENST00000614051 PAX1P15863 534 aa12.99□□□□□ -0.33
CCL3-206ENST00000614051 DNASE1P24855 282 aa12.99□□□□□ -0.33
CCL3-206ENST00000614051 PRDX2P32119 198 aa12.99□□□□□ -0.33
CCL3-206ENST00000614051 PLAC9Q5JTB6 97 aa12.99□□□□□ -0.33
CCL3-206ENST00000614051 SPIN3Q5JUX0 258 aa12.99□□□□□ -0.33
CCL3-206ENST00000614051 NKAPLQ5M9Q1 402 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms