RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 OR8J1Q8NGP2 316 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 PIGXQ8TBF5 258 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 SLC22A8Q8TCC7 542 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 MAGEE2Q8TD90 523 aaPredicted RBP2.34□□□□□ -2.03
VRK1-207ENST00000557352 GNPDA2Q8TDQ7 276 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 ST8SIA1Q92185 356 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 OSTF1Q92882 214 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 FGF11Q92914 225 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 HGDQ93099 445 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 TSLPQ969D9 159 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 MCHR2Q969V1 340 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 SDSLQ96GA7 329 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 SLC41A3Q96GZ6 507 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 MCHR1Q99705 422 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 BCL7BQ9BQE9 202 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 PRSS27Q9BQR3 290 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 NUDT9Q9BW91 350 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 MRPS26Q9BYN8 205 aaKnown RBP2.34□□□□□ -2.03
VRK1-207ENST00000557352 ULBP3Q9BZM4 244 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 UCK2Q9BZX2 261 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 OR8D2Q9GZM6 311 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 RACGAP1Q9H0H5 632 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 NXF5Q9H1B4 397 aaKnown RBP2.34□□□□□ -2.03
VRK1-207ENST00000557352 DUSP21Q9H596 190 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 ANKRA2Q9H9E1 313 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 TMEM27Q9HBJ8 222 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 APMAPQ9HDC9 416 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 SH2D2AQ9NP31 389 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 FANCFQ9NPI8 374 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 MEPEQ9NQ76 525 aaPredicted RBP2.34□□□□□ -2.03
VRK1-207ENST00000557352 PNO1Q9NRX1 252 aaKnown RBP2.34□□□□□ -2.03
VRK1-207ENST00000557352 FKBP14Q9NWM8 211 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 SLC39A1Q9NY26 324 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 RDH8Q9NYR8 311 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 IL20Q9NYY1 176 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 UBAP1Q9NZ09 502 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 ZNF223Q9UK11 482 aaPredicted RBP2.34□□□□□ -2.03
VRK1-207ENST00000557352 BAIAP2Q9UQB8 552 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 OR10H1Q9Y4A9 318 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 WSB1Q9Y6I7 421 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 V9GYQ6 96 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 FRYQ5TBA9 3013 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 AKAP13Q12802 2813 aa2.34□□□□□ -2.04
VRK1-207ENST00000557352 TPRP12270 2363 aaKnown RBP2.34□□□□□ -2.04
VRK1-207ENST00000557352 DOCK11Q5JSL3 2073 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 HIVEP3Q5T1R4 2406 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 SHANK1Q9Y566 2161 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 DIDO1Q9BTC0 2240 aaKnown RBP2.33□□□□□ -2.04
VRK1-207ENST00000557352 MGAQ8IWI9 3026 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 DMXL2Q8TDJ6 3036 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 A0A087WZY1 265 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 ARPC4-TTLL3A0A0A6YYG9 625 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 NSG1A0A0A6YYJ2 146 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 A0A1B0GWA3 101 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 IRGMA1A4Y4 181 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 LRCOL1A6NCL2 159 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 EFCAB10A6NFE3 127 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 CLDN24A6NM45 220 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 SNTNA6NMZ2 147 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 DHRS7CA6NNS2 312 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 TP53I11O14683 189 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 ARPC3O15145 178 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 ZNF208O43345 1280 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 OR10H3O60404 316 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 HCN1O60741 890 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 NPIPB7O75200 414 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 ZNF324O75467 553 aaPredicted RBP2.33□□□□□ -2.04
VRK1-207ENST00000557352 WBP4O75554 376 aaKnown RBP2.33□□□□□ -2.04
VRK1-207ENST00000557352 SCGB2A1O75556 95 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 DIRAS1O95057 198 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 RCBTB2O95199 551 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 CSTAP01040 98 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 HMGN1P05114 100 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 SERPINA7P05543 415 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 GNAO1P09471 354 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 CCL4P13236 92 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 HPGDP15428 266 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 PGCP20142 388 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 PAICSP22234 425 aaKnown RBP2.33□□□□□ -2.04
VRK1-207ENST00000557352 ELK4P28324 431 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 IL12BP29460 328 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 HTR1FP30939 366 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 EVI2BP34910 448 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 EIF1P41567 113 aaKnown RBP2.33□□□□□ -2.04
VRK1-207ENST00000557352 RPL5P46777 297 aaKnown RBP2.33□□□□□ -2.04
VRK1-207ENST00000557352 P2RX1P51575 399 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 CRISP1P54107 249 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 PRPS1P60891 318 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 COPZ1P61923 177 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 RPS15P62841 145 aaKnown RBP2.33□□□□□ -2.04
VRK1-207ENST00000557352 SLC35A2P78381 396 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 BDH1Q02338 343 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 PLCXD2Q0VAA5 305 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 MAD2L1BPQ15013 274 aaPredicted RBP2.33□□□□□ -2.04
VRK1-207ENST00000557352 PTGES3Q15185 160 aaKnown RBP2.33□□□□□ -2.04
VRK1-207ENST00000557352 OR1Q1Q15612 314 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 ZNF791Q3KP31 576 aaPredicted RBP2.33□□□□□ -2.04
VRK1-207ENST00000557352 CCNJQ5T5M9 372 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 HES3Q5TGS1 186 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 ZNF57Q68EA5 555 aaPredicted RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms