RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 HTR1AP08908 422 aa13.14□□□□□ -0.31
CHGA-204ENST00000556076 JUNBP17275 347 aaPredicted RBP13.14□□□□□ -0.31
CHGA-204ENST00000556076 CCR9P51686 369 aa13.14□□□□□ -0.31
CHGA-204ENST00000556076 FUT6P51993 359 aa13.14□□□□□ -0.31
CHGA-204ENST00000556076 EDDM3BP56851 147 aa13.14□□□□□ -0.31
CHGA-204ENST00000556076 PROK1P58294 105 aa13.14□□□□□ -0.31
CHGA-204ENST00000556076 ADARB1P78563 741 aaKnown RBP13.14□□□□□ -0.31
CHGA-204ENST00000556076 ACSM1Q08AH1 577 aa13.14□□□□□ -0.31
CHGA-204ENST00000556076 EDDM3AQ14507 147 aa13.14□□□□□ -0.31
CHGA-204ENST00000556076 LDLRAD2Q5SZI1 272 aa13.14□□□□□ -0.31
CHGA-204ENST00000556076 GDPGP1Q6ZNW5 385 aa13.14□□□□□ -0.31
CHGA-204ENST00000556076 SYS1Q8N2H4 156 aa13.14□□□□□ -0.31
CHGA-204ENST00000556076 BEND2Q8NDZ0 799 aa13.14□□□□□ -0.31
CHGA-204ENST00000556076 OR52N4Q8NGI2 321 aa13.14□□□□□ -0.31
CHGA-204ENST00000556076 EMG1Q92979 244 aaKnown RBP13.14□□□□□ -0.31
CHGA-204ENST00000556076 BORCS8Q96FH0 119 aa13.14□□□□□ -0.31
CHGA-204ENST00000556076 C4orf36Q96KX1 117 aa13.14□□□□□ -0.31
CHGA-204ENST00000556076 SSX3Q99909 188 aa13.14□□□□□ -0.31
CHGA-204ENST00000556076 ALG8Q9BVK2 526 aa13.14□□□□□ -0.31
CHGA-204ENST00000556076 SF3B6Q9Y3B4 125 aaKnown RBP13.14□□□□□ -0.31
CHGA-204ENST00000556076 A0A1B0GUS0 222 aa13.13□□□□□ -0.31
CHGA-204ENST00000556076 BTBD17A6NE02 478 aa13.13□□□□□ -0.31
CHGA-204ENST00000556076 GATBO75879 557 aaKnown RBP13.13□□□□□ -0.31
CHGA-204ENST00000556076 SERPINA3P01011 423 aa13.13□□□□□ -0.31
CHGA-204ENST00000556076 AZGP1P25311 298 aaKnown RBP13.13□□□□□ -0.31
CHGA-204ENST00000556076 RAB13P51153 203 aa13.13□□□□□ -0.31
CHGA-204ENST00000556076 SLC34A1Q06495 639 aa13.13□□□□□ -0.31
CHGA-204ENST00000556076 SLC35E4Q6ICL7 350 aa13.13□□□□□ -0.31
CHGA-204ENST00000556076 OR52I1Q8NGK6 324 aa13.13□□□□□ -0.31
CHGA-204ENST00000556076 OR5D18Q8NGL1 313 aa13.13□□□□□ -0.31
CHGA-204ENST00000556076 APH1BQ8WW43 257 aa13.13□□□□□ -0.31
CHGA-204ENST00000556076 JAM3Q9BX67 310 aa13.13□□□□□ -0.31
CHGA-204ENST00000556076 FGF20Q9NP95 211 aaPredicted RBP13.13□□□□□ -0.31
CHGA-204ENST00000556076 IGKV1-12A0A0C4DH73 117 aa13.12□□□□□ -0.31
CHGA-204ENST00000556076 ERICH4A6NGS2 130 aa13.12□□□□□ -0.31
CHGA-204ENST00000556076 OR4C45A6NMZ5 311 aa13.12□□□□□ -0.31
CHGA-204ENST00000556076 CHST1O43916 411 aa13.12□□□□□ -0.31
CHGA-204ENST00000556076 WBP4O75554 376 aaKnown RBP13.12□□□□□ -0.31
CHGA-204ENST00000556076 IGKV1D-12P01611 117 aa13.12□□□□□ -0.31
CHGA-204ENST00000556076 ISG15P05161 165 aa13.12□□□□□ -0.31
CHGA-204ENST00000556076 ZNF20P17024 532 aa13.12□□□□□ -0.31
CHGA-204ENST00000556076 ATF1P18846 271 aa13.12□□□□□ -0.31
CHGA-204ENST00000556076 DCKP27707 260 aa13.12□□□□□ -0.31
CHGA-204ENST00000556076 CAPGP40121 348 aa13.12□□□□□ -0.31
CHGA-204ENST00000556076 MTCP1P56278 107 aa13.12□□□□□ -0.31
CHGA-204ENST00000556076 MED21Q13503 144 aa13.12□□□□□ -0.31
CHGA-204ENST00000556076 MIDNQ504T8 468 aa13.12□□□□□ -0.31
CHGA-204ENST00000556076 ASPHD2Q6ICH7 369 aa13.12□□□□□ -0.31
CHGA-204ENST00000556076 CRIP3Q6Q6R5 217 aa13.12□□□□□ -0.31
CHGA-204ENST00000556076 OR13C3Q8NGS6 347 aa13.12□□□□□ -0.31
CHGA-204ENST00000556076 OR13C9Q8NGT0 318 aa13.12□□□□□ -0.31
CHGA-204ENST00000556076 ERVK13-1Q9NX77 482 aa13.12□□□□□ -0.31
CHGA-204ENST00000556076 KIAA2026Q5HYC2 2103 aa13.12□□□□□ -0.31
CHGA-204ENST00000556076 C17orf98A8MV24 154 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 SIRPB1O00241 398 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 PSPNO60542 156 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 TSPAN15O95858 294 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 HAND1O96004 215 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 CHRM2P08172 466 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 PRKACAP17612 351 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 GABRR1P24046 479 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 RBP2P50120 134 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 GBX2P52951 348 aaPredicted RBP13.11□□□□□ -0.31
CHGA-204ENST00000556076 RPL15P61313 204 aaKnown RBP13.11□□□□□ -0.31
CHGA-204ENST00000556076 ALKBH1Q13686 389 aaKnown RBP13.11□□□□□ -0.31
CHGA-204ENST00000556076 CNN3Q15417 329 aaKnown RBP13.11□□□□□ -0.31
CHGA-204ENST00000556076 SMN1Q16637 294 aaKnown RBP13.11□□□□□ -0.31
CHGA-204ENST00000556076 BAIAP2L2Q6UXY1 529 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 GDPD3Q7L5L3 318 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 C8orf59Q8N0T1 100 aaPredicted RBP13.11□□□□□ -0.31
CHGA-204ENST00000556076 ZNF676Q8N7Q3 588 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 OR4S1Q8NGB4 309 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 CNIH3Q8TBE1 160 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 PIFOQ8TCI5 191 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 PP6455Q8WZ26 134 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 NKX3-1Q99801 234 aaPredicted RBP13.11□□□□□ -0.31
CHGA-204ENST00000556076 ZNF649Q9BS31 505 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 FAM234AQ9H0X4 552 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 C16orf95Q9H693 158 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 HEXA-AS1Q9H8Q6 139 aa13.11□□□□□ -0.31
CHGA-204ENST00000556076 H0YHG0 523 aa13.1□□□□□ -0.31
CHGA-204ENST00000556076 H0YJX3 145 aa13.1□□□□□ -0.31
CHGA-204ENST00000556076 MMP23AO75900 390 aa13.1□□□□□ -0.31
CHGA-204ENST00000556076 CLPXO76031 633 aa13.1□□□□□ -0.31
CHGA-204ENST00000556076 CLIC3O95833 236 aa13.1□□□□□ -0.31
CHGA-204ENST00000556076 CCDC159P0C7I6 412 aa13.1□□□□□ -0.31
CHGA-204ENST00000556076 ZNF728P0DKX0 622 aa13.1□□□□□ -0.31
CHGA-204ENST00000556076 TGFBR2P37173 567 aa13.1□□□□□ -0.31
CHGA-204ENST00000556076 ATP1B3P54709 279 aa13.1□□□□□ -0.31
CHGA-204ENST00000556076 GRK1Q15835 563 aa13.1□□□□□ -0.31
CHGA-204ENST00000556076 LRRC75BQ2VPJ9 315 aa13.1□□□□□ -0.31
CHGA-204ENST00000556076 TMPRSS11AQ6ZMR5 421 aa13.1□□□□□ -0.31
CHGA-204ENST00000556076 OR8H2Q8N162 312 aa13.1□□□□□ -0.31
CHGA-204ENST00000556076 FAM58AQ8N1B3 248 aa13.1□□□□□ -0.31
CHGA-204ENST00000556076 OR5R1Q8NH85 324 aa13.1□□□□□ -0.31
CHGA-204ENST00000556076 PDCD1LG2Q9BQ51 273 aa13.1□□□□□ -0.31
CHGA-204ENST00000556076 VCX3BQ9H321 246 aa13.1□□□□□ -0.31
CHGA-204ENST00000556076 TCF7L1Q9HCS4 588 aa13.1□□□□□ -0.31
CHGA-204ENST00000556076 CHCHD3Q9NX63 227 aaKnown RBP13.1□□□□□ -0.31
CHGA-204ENST00000556076 HHLA2Q9UM44 414 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms