RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 CEP78Q5JTW2 689 aa9.27□□□□□ -0.93
CLCF1-202ENST00000533438 BCL2L15Q5TBC7 163 aa9.27□□□□□ -0.93
CLCF1-202ENST00000533438 ZBTB37Q5TC79 503 aa9.27□□□□□ -0.93
CLCF1-202ENST00000533438 TREML4Q6UXN2 200 aa9.27□□□□□ -0.93
CLCF1-202ENST00000533438 C1orf122Q6ZSJ8 110 aa9.27□□□□□ -0.93
CLCF1-202ENST00000533438 SATL1Q86VE3 508 aa9.27□□□□□ -0.93
CLCF1-202ENST00000533438 CMTM4Q8IZR5 234 aa9.27□□□□□ -0.93
CLCF1-202ENST00000533438 OR5A2Q8NGI9 324 aa9.27□□□□□ -0.93
CLCF1-202ENST00000533438 OR5AK2Q8NH90 309 aa9.27□□□□□ -0.93
CLCF1-202ENST00000533438 OR51E1Q8TCB6 317 aa9.27□□□□□ -0.93
CLCF1-202ENST00000533438 AQP3Q92482 292 aa9.27□□□□□ -0.93
CLCF1-202ENST00000533438 H1FXQ92522 213 aaKnown RBP9.27□□□□□ -0.93
CLCF1-202ENST00000533438 GHSRQ92847 366 aa9.27□□□□□ -0.93
CLCF1-202ENST00000533438 PPP1R14AQ96A00 147 aa9.27□□□□□ -0.93
CLCF1-202ENST00000533438 CITED1Q99966 193 aa9.27□□□□□ -0.93
CLCF1-202ENST00000533438 GPR84Q9NQS5 396 aa9.27□□□□□ -0.93
CLCF1-202ENST00000533438 SLC22A13Q9Y226 551 aa9.27□□□□□ -0.93
CLCF1-202ENST00000533438 MAB21L2Q9Y586 359 aa9.27□□□□□ -0.93
CLCF1-202ENST00000533438 PNMA8CA0A1B0GUJ8 204 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 OR5B21A6NL26 309 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 M0R1W7 72 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 DHRS3O75911 302 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 UBCP0CG48 685 aaKnown RBP9.26□□□□□ -0.93
CLCF1-202ENST00000533438 PSG2P11465 335 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 FAHP16930 419 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 GALP22466 123 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 PRB3Q04118 309 aaPredicted RBP9.26□□□□□ -0.93
CLCF1-202ENST00000533438 KLRD1Q13241 179 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 TRAM1Q15629 374 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 YIF1BQ5BJH7 314 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 TMEM244Q5VVB8 128 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 TMEM42Q69YG0 159 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 CD200R1LQ6Q8B3 271 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 Q6ZSR3 168 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 MOB3CQ70IA8 216 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 MS4A15Q8N5U1 240 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 ZNRF1Q8ND25 227 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 LINC01006Q8NI28 216 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 ZNF671Q8TAW3 534 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 PDCD1LG2Q9BQ51 273 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 COMMD4Q9H0A8 199 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 DPAGT1Q9H3H5 408 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 GTF2A1LQ9UNN4 478 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 PIGLQ9Y2B2 252 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 ZNF281Q9Y2X9 895 aa9.26□□□□□ -0.93
CLCF1-202ENST00000533438 PRKDCP78527 4128 aaKnown RBP9.25□□□□□ -0.93
CLCF1-202ENST00000533438 NPFFO15130 113 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 SC5DO75845 299 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 NRASP01111 189 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 FBP1P09467 338 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 CCL1P22362 96 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 GABRA2P47869 451 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 UBE2E1P51965 193 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 KRTAP10-3P60369 221 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 RPS11P62280 158 aaKnown RBP eCLIP9.25□□□□□ -0.93
CLCF1-202ENST00000533438 RPS25P62851 125 aaKnown RBP9.25□□□□□ -0.93
CLCF1-202ENST00000533438 DEFA6Q01524 100 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 TAF9Q16594 264 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 TIMM50Q3ZCQ8 353 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 PLCXD3Q63HM9 321 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 HAGHLQ6PII5 290 aaPredicted RBP9.25□□□□□ -0.93
CLCF1-202ENST00000533438 ACP7Q6ZNF0 438 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 C17orf107Q6ZR85 190 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 COMMD2Q86X83 199 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 ANKRD13BQ86YJ7 626 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 ZNF676Q8N7Q3 588 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 ZSCAN4Q8NAM6 433 aaPredicted RBP9.25□□□□□ -0.93
CLCF1-202ENST00000533438 POC1AQ8NBT0 407 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 CCDC54Q8NEL0 328 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 RGP1Q92546 391 aaPredicted RBP9.25□□□□□ -0.93
CLCF1-202ENST00000533438 SDSLQ96GA7 329 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 FUNDC2Q9BWH2 189 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 ELL3Q9HB65 397 aaPredicted RBP9.25□□□□□ -0.93
CLCF1-202ENST00000533438 BATF3Q9NR55 127 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 RASL12Q9NYN1 266 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 ENPP5Q9UJA9 477 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 STUB1Q9UNE7 303 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 FAM96BQ9Y3D0 163 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 V9GYS6 101 aa9.25□□□□□ -0.93
CLCF1-202ENST00000533438 DSCAML1Q8TD84 2053 aa9.24□□□□□ -0.93
CLCF1-202ENST00000533438 TRBV5-5A0A0J9YX44 114 aa9.24□□□□□ -0.93
CLCF1-202ENST00000533438 A0A1B0GTI1 187 aa9.24□□□□□ -0.93
CLCF1-202ENST00000533438 SMIM31A0A1B0GVY4 71 aa9.24□□□□□ -0.93
CLCF1-202ENST00000533438 LOC107986453A0A1B0GWG9 222 aa9.24□□□□□ -0.93
CLCF1-202ENST00000533438 TRDV1A0A1B0GX56 115 aa9.24□□□□□ -0.93
CLCF1-202ENST00000533438 A0A1W2PQ09 198 aa9.24□□□□□ -0.93
CLCF1-202ENST00000533438 DPPA5A6NC42 116 aa9.24□□□□□ -0.93
CLCF1-202ENST00000533438 NOS1APO75052 506 aaPredicted RBP9.24□□□□□ -0.93
CLCF1-202ENST00000533438 MTRF1O75570 445 aaKnown RBP9.24□□□□□ -0.93
CLCF1-202ENST00000533438 CLPXO76031 633 aa9.24□□□□□ -0.93
CLCF1-202ENST00000533438 GABARAPO95166 117 aa9.24□□□□□ -0.93
CLCF1-202ENST00000533438 SERPINA3P01011 423 aa9.24□□□□□ -0.93
CLCF1-202ENST00000533438 PGA5P0DJD9 388 aa9.24□□□□□ -0.93
CLCF1-202ENST00000533438 NDUFB7P17568 137 aa9.24□□□□□ -0.93
CLCF1-202ENST00000533438 GADD45AP24522 165 aa9.24□□□□□ -0.93
CLCF1-202ENST00000533438 SAA4P35542 130 aa9.24□□□□□ -0.93
CLCF1-202ENST00000533438 PROK1P58294 105 aa9.24□□□□□ -0.93
CLCF1-202ENST00000533438 HCP5Q6MZN7 132 aa9.24□□□□□ -0.93
CLCF1-202ENST00000533438 BRICD5Q6PL45 260 aa9.24□□□□□ -0.93
CLCF1-202ENST00000533438 UNQ9370/PRO34162Q6UXP9 181 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms