RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 SRMP19623 302 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 SERPINA2P20848 420 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 ZFP36P26651 326 aaKnown RBP6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 CALRP27797 417 aaKnown RBP6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 PTGFRP43088 359 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 RPS11P62280 158 aaKnown RBP eCLIP6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 RPS25P62851 125 aaKnown RBP6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 HOXA4Q00056 320 aaPredicted RBP6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 TIMM50Q3ZCQ8 353 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 UBE2UQ5VVX9 321 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 ZNF788Q6ZQV5 615 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 CDH26Q8IXH8 852 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 PHC2Q8IXK0 858 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 FAM185AQ8N0U4 392 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 PXT1Q8NFP0 134 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 OR51A2Q8NGJ7 313 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 NANPQ8TBE9 248 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 SEH1LQ96EE3 360 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 GAFA1Q96PS6 74 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 UQCC2Q9BRT2 126 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 PLGRKTQ9HBL7 147 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 RBFOX1Q9NWB1 397 aaKnown RBP6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 ONECUT1Q9UBC0 465 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 SSR3Q9UNL2 185 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 MRPS28Q9Y2Q9 187 aaKnown RBP6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 POLR3KQ9Y2Y1 108 aaPredicted RBP6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 NSD1Q96L73 2696 aaPredicted RBP6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 NIPBLQ6KC79 2804 aaeCLIP6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 IGKV1D-17A0A075B6S4 117 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 TRBV23-1A0A0A0MS06 115 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 SIRPB1O00241 398 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 GABRPO00591 440 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 CRLF1O75462 422 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 CRTAPO75718 401 aaPredicted RBP6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 TOX4O94842 621 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 UBBP0CG47 229 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 CALCBP10092 127 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 GTF2F2P13984 249 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 IGFBP3P17936 291 aaPredicted RBP6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 FPR2P25090 351 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 OR3A4PP47883 348 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 NPBWR2P48146 333 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 CAV3P56539 151 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 EDDM3BP56851 147 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 ERVK11-1P61568 191 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 RPL31P62899 125 aaKnown RBP6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 COL10A1Q03692 680 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 KRTAP1-1Q07627 177 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 GRK1Q15835 563 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 SLC22A6Q4U2R8 563 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 GLIPR1L1Q6UWM5 242 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 LINC00596Q86U02 117 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 OSR2Q8N2R0 312 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 CHST4Q8NCG5 386 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 ZNRF1Q8ND25 227 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 NEK7Q8TDX7 302 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 MUL1Q969V5 352 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 ORAI1Q96D31 301 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 SDSLQ96GA7 329 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 SNX22Q96L94 193 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 PCGF1Q9BSM1 259 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 FAM234AQ9H0X4 552 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 CST11Q9H112 138 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 CNTD2Q9H8S5 307 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 HES4Q9HCC6 221 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 HMG20AQ9NP66 347 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 NDUFB11Q9NX14 153 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 CTSZQ9UBR2 303 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 GHRLQ9UBU3 117 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 INSIG2Q9Y5U4 225 aa6.76□□□□□ -1.33
TM4SF1-204ENST00000493348 TRAV8-7A0A075B6U6 113 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 KIR2DS1A0A191URI9 304 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 OR7C1O76099 320 aaPredicted RBP6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 CDRT1O95170 752 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 TK1P04183 234 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 UCHL1P09936 223 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 HTR2CP28335 458 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 DUSP1P28562 367 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 CEBPDP49716 269 aaPredicted RBP6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 RIPPLY3P57055 190 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 ZP1P60852 638 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 FGF12P61328 243 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 ARF6P62330 175 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 EDDM3AQ14507 147 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 IL13RA2Q14627 380 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 ZNF146Q15072 292 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 DGUOKQ16854 277 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 PAN3Q58A45 887 aaKnown RBP6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 ATAD3CQ5T2N8 411 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 GPR157Q5UAW9 335 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 ZNF529Q6P280 563 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 UNQ9370/PRO34162Q6UXP9 181 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 RBMS3Q6XE24 437 aaKnown RBP6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 ZNF841Q6ZN19 808 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 IL17RELQ6ZVW7 336 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 TRAPPC6BQ86SZ2 158 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 BPIFB2Q8N4F0 458 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 CD177Q8N6Q3 437 aa6.75□□□□□ -1.33
TM4SF1-204ENST00000493348 OR10K1Q8NGX5 313 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms