RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 DCUN1D5Q9BTE7 237 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 JAM3Q9BX67 310 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 FAM234AQ9H0X4 552 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 WDR13Q9H1Z4 485 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 C16orf95Q9H693 158 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 METTL8Q9H825 291 aaKnown RBP8.52□□□□□ -1.05
TTC28-207ENST00000490475 TNFRSF19Q9NS68 423 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 PLCXD1Q9NUJ7 323 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 BABAM2Q9NXR7 383 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 PSORS1C1Q9UIG5 152 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 VPREB3Q9UKI3 123 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 SOX21Q9Y651 276 aaPredicted RBP8.52□□□□□ -1.05
TTC28-207ENST00000490475 SIRT4Q9Y6E7 314 aaPredicted RBP8.52□□□□□ -1.05
TTC28-207ENST00000490475 TRRAPQ9Y4A5 3859 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 TRBV23-1A0A0A0MS06 115 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 TRBV2A0A0J9YWF9 115 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 A0A0U1RQK1 487 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 hCG_1809904A0A1W2PP81 198 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 A0A1W2PPE2 198 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 FAM230AA0A1W2PPH8 454 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 A0A1W2PR64 198 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 A0A1W2PRV1 198 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 PQLC2LA1A4F0 135 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 IRGMA1A4Y4 181 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 EFCAB10A6NFE3 127 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 ANKRD61A6NGH8 418 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 OR5B21A6NL26 309 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 DHRS7CA6NNS2 312 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 PTGES3LE9PB15 166 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.51□□□□□ -1.05
TTC28-207ENST00000490475 SIGLEC5O15389 551 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 ZFPL1O95159 310 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 ISG15P05161 165 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 CD40LGP29965 261 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 UBE2E1P51965 193 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 RELBQ01201 579 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 OXA1LQ15070 435 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 HAGHLQ6PII5 290 aaPredicted RBP8.51□□□□□ -1.05
TTC28-207ENST00000490475 TMPRSS11AQ6ZMR5 421 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 ZNF788Q6ZQV5 615 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 AHSA2Q719I0 299 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 ANGPTL5Q86XS5 388 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 CENPSQ8N2Z9 138 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 LINC01006Q8NI28 216 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 TRMT10AQ8TBZ6 339 aaKnown RBP8.51□□□□□ -1.05
TTC28-207ENST00000490475 AQP3Q92482 292 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 H1FXQ92522 213 aaKnown RBP8.51□□□□□ -1.05
TTC28-207ENST00000490475 PDCD1LG2Q9BQ51 273 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 FUNDC2Q9BWH2 189 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 PLEKHA1Q9HB21 404 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 TCF7L1Q9HCS4 588 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 RAB18Q9NP72 206 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 SNTG1Q9NSN8 517 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 PAK1IP1Q9NWT1 392 aaPredicted RBP8.51□□□□□ -1.05
TTC28-207ENST00000490475 RHBDL2Q9NX52 303 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 RASL12Q9NYN1 266 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 ZNRD1Q9P1U0 126 aa8.51□□□□□ -1.05
TTC28-207ENST00000490475 SLC25A10Q9UBX3 287 aaPredicted RBP8.51□□□□□ -1.05
TTC28-207ENST00000490475 EXOSC1Q9Y3B2 195 aaKnown RBP8.51□□□□□ -1.05
TTC28-207ENST00000490475 SF3B6Q9Y3B4 125 aaKnown RBP8.51□□□□□ -1.05
TTC28-207ENST00000490475 NOTCH1P46531 2555 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 A0A1W2PQ09 198 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 NPFFO15130 113 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 KCNAB3O43448 404 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 SYNGR1O43759 233 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 TSPAN9O75954 239 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 INMTO95050 263 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 LALBAP00709 142 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 SERPINA3P01011 423 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 IGHV4-59P01825 116 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 TFF1P04155 84 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 ACAA1P09110 424 aaPredicted RBP8.5□□□□□ -1.05
TTC28-207ENST00000490475 PIPP12273 146 aaPredicted RBP8.5□□□□□ -1.05
TTC28-207ENST00000490475 ZNF182P17025 639 aaPredicted RBP8.5□□□□□ -1.05
TTC28-207ENST00000490475 MYL12AP19105 171 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 GLRA1P23415 457 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 HAAOP46952 286 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 PROK1P58294 105 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 SLC35A2P78381 396 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 IKZF1Q13422 519 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 AANATQ16613 207 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 CTF1Q16619 201 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 C2orf68Q2NKX9 166 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 MIDNQ504T8 468 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 RPL22L1Q6P5R6 122 aaKnown RBP8.5□□□□□ -1.05
TTC28-207ENST00000490475 BATF2Q8N1L9 274 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 STX19Q8N4C7 294 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 FAM216BQ8N7L0 139 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 CCDC54Q8NEL0 328 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 OR13C3Q8NGS6 347 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 OR5AK2Q8NH90 309 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 SGCDQ92629 289 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 ZNF488Q96MN9 340 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 AKIP1Q9NQ31 210 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 FKBP14Q9NWM8 211 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 CNOT2Q9NZN8 540 aaKnown RBP8.5□□□□□ -1.05
TTC28-207ENST00000490475 NLKQ9UBE8 527 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 HHLA2Q9UM44 414 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 SLC7A11Q9UPY5 501 aa8.5□□□□□ -1.05
TTC28-207ENST00000490475 IGKV1-27A0A075B6S5 117 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms