RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 CASC1Q6TDU7 716 aa-0.1□□□□□ -2.43
SSB-208ENST00000468600 COA5Q86WW8 74 aa-0.1□□□□□ -2.43
SSB-208ENST00000468600 TBC1D31Q96DN5 1066 aa-0.1□□□□□ -2.43
SSB-208ENST00000468600 Q9BRP9 147 aa-0.1□□□□□ -2.43
SSB-208ENST00000468600 SPRR2GQ9BYE4 73 aa-0.1□□□□□ -2.43
SSB-208ENST00000468600 ASB7Q9H672 318 aa-0.1□□□□□ -2.43
SSB-208ENST00000468600 MCUBQ9NWR8 336 aa-0.1□□□□□ -2.43
SSB-208ENST00000468600 PTTG3PQ9NZH4 202 aa-0.1□□□□□ -2.43
SSB-208ENST00000468600 BLOC1S6Q9UL45 172 aa-0.1□□□□□ -2.43
SSB-208ENST00000468600 INSIG2Q9Y5U4 225 aa-0.1□□□□□ -2.43
SSB-208ENST00000468600 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP-0.1□□□□□ -2.43
SSB-208ENST00000468600 A0A075B6Q4 140 aa-0.11□□□□□ -2.43
SSB-208ENST00000468600 BCKDKO14874 412 aa-0.11□□□□□ -2.43
SSB-208ENST00000468600 XRCC2O43543 280 aa-0.11□□□□□ -2.43
SSB-208ENST00000468600 CPMP14384 443 aa-0.11□□□□□ -2.43
SSB-208ENST00000468600 IRF8Q02556 426 aa-0.11□□□□□ -2.43
SSB-208ENST00000468600 DEFB115Q30KQ5 88 aa-0.11□□□□□ -2.43
SSB-208ENST00000468600 ZNF404Q494X3 552 aa-0.11□□□□□ -2.43
SSB-208ENST00000468600 GID4Q8IVV7 300 aa-0.11□□□□□ -2.43
SSB-208ENST00000468600 TEX9Q8N6V9 391 aa-0.11□□□□□ -2.43
SSB-208ENST00000468600 OR4A5Q8NH83 315 aa-0.11□□□□□ -2.43
SSB-208ENST00000468600 YPEL4Q96NS1 127 aa-0.11□□□□□ -2.43
SSB-208ENST00000468600 GABRG3Q99928 467 aa-0.11□□□□□ -2.43
SSB-208ENST00000468600 LINC00588Q9Y4M8 146 aa-0.11□□□□□ -2.43
SSB-208ENST00000468600 ZNF706Q9Y5V0 76 aaPredicted RBP-0.11□□□□□ -2.43
SSB-208ENST00000468600 H0Y8G0 127 aa-0.12□□□□□ -2.43
SSB-208ENST00000468600 RNF13O43567 381 aa-0.12□□□□□ -2.43
SSB-208ENST00000468600 COX7A2P2O60397 106 aa-0.12□□□□□ -2.43
SSB-208ENST00000468600 SOX14O95416 240 aa-0.12□□□□□ -2.43
SSB-208ENST00000468600 ZNF705DP0CH99 300 aaPredicted RBP-0.12□□□□□ -2.43
SSB-208ENST00000468600 ZNF705BP0CI00 300 aaPredicted RBP-0.12□□□□□ -2.43
SSB-208ENST00000468600 STOMP27105 288 aa-0.12□□□□□ -2.43
SSB-208ENST00000468600 SULT1E1P49888 294 aa-0.12□□□□□ -2.43
SSB-208ENST00000468600 TIMM23BQ5SRD1 257 aa-0.12□□□□□ -2.43
SSB-208ENST00000468600 UNQ6190/PRO20217Q6UXQ8 127 aa-0.12□□□□□ -2.43
SSB-208ENST00000468600 LINC00596Q86U02 117 aa-0.12□□□□□ -2.43
SSB-208ENST00000468600 NIT1Q86X76 327 aa-0.12□□□□□ -2.43
SSB-208ENST00000468600 OR6K6Q8NGW6 343 aa-0.12□□□□□ -2.43
SSB-208ENST00000468600 MAL2Q969L2 176 aa-0.12□□□□□ -2.43
SSB-208ENST00000468600 SMIM8Q96KF7 97 aa-0.12□□□□□ -2.43
SSB-208ENST00000468600 DDX18Q9NVP1 670 aaKnown RBP-0.12□□□□□ -2.43
SSB-208ENST00000468600 SLC23A2Q9UGH3 650 aa-0.12□□□□□ -2.43
SSB-208ENST00000468600 DENND4BO75064 1496 aaPredicted RBP-0.12□□□□□ -2.43
SSB-208ENST00000468600 COL18A1P39060 1754 aa-0.12□□□□□ -2.43
SSB-208ENST00000468600 LOC102725191A0A1B0GVB3 256 aa-0.13□□□□□ -2.43
SSB-208ENST00000468600 OR5H14A6NHG9 310 aa-0.13□□□□□ -2.43
SSB-208ENST00000468600 RHOCP08134 193 aa-0.13□□□□□ -2.43
SSB-208ENST00000468600 ZCWPW2Q504Y3 356 aa-0.13□□□□□ -2.43
SSB-208ENST00000468600 TTC32Q5I0X7 151 aa-0.13□□□□□ -2.43
SSB-208ENST00000468600 CLEC19AQ6UXS0 136 aa-0.13□□□□□ -2.43
SSB-208ENST00000468600 APRG1Q8IVJ8 170 aa-0.13□□□□□ -2.43
SSB-208ENST00000468600 NRGNQ92686 78 aa-0.13□□□□□ -2.43
SSB-208ENST00000468600 CAPZA3Q96KX2 299 aa-0.13□□□□□ -2.43
SSB-208ENST00000468600 GSDMAQ96QA5 445 aa-0.13□□□□□ -2.43
SSB-208ENST00000468600 NUP58Q9BVL2 599 aa-0.13□□□□□ -2.43
SSB-208ENST00000468600 NT5C3AQ9H0P0 336 aa-0.13□□□□□ -2.43
SSB-208ENST00000468600 XKR8Q9H6D3 395 aa-0.13□□□□□ -2.43
SSB-208ENST00000468600 CD209Q9NNX6 404 aa-0.13□□□□□ -2.43
SSB-208ENST00000468600 AP3M1Q9Y2T2 418 aa-0.13□□□□□ -2.43
SSB-208ENST00000468600 URGCP-MRPS24S4R325 110 aa-0.13□□□□□ -2.43
SSB-208ENST00000468600 MIA3Q5JRA6 1907 aa-0.13□□□□□ -2.43
SSB-208ENST00000468600 AK9Q5TCS8 1911 aa-0.14□□□□□ -2.43
SSB-208ENST00000468600 IGKV3D-7A0A0C4DH55 119 aa-0.14□□□□□ -2.43
SSB-208ENST00000468600 IGKV3OR2-268A0A0C4DH90 116 aa-0.14□□□□□ -2.43
SSB-208ENST00000468600 LSM1O15116 133 aaKnown RBP-0.14□□□□□ -2.43
SSB-208ENST00000468600 ERCC1P07992 297 aaPredicted RBP-0.14□□□□□ -2.43
SSB-208ENST00000468600 MSR1P21757 451 aa-0.14□□□□□ -2.43
SSB-208ENST00000468600 ATP6AP1LQ52LC2 224 aa-0.14□□□□□ -2.43
SSB-208ENST00000468600 OR2M3Q8NG83 312 aa-0.14□□□□□ -2.43
SSB-208ENST00000468600 OR52E5Q8NH55 327 aa-0.14□□□□□ -2.43
SSB-208ENST00000468600 SPACA4Q8TDM5 124 aa-0.14□□□□□ -2.43
SSB-208ENST00000468600 RNF133Q8WVZ7 376 aa-0.14□□□□□ -2.43
SSB-208ENST00000468600 HIST1H2BAQ96A08 127 aa-0.14□□□□□ -2.43
SSB-208ENST00000468600 CMBLQ96DG6 245 aa-0.14□□□□□ -2.43
SSB-208ENST00000468600 PLEKHA1Q9HB21 404 aa-0.14□□□□□ -2.43
SSB-208ENST00000468600 RPUSD1Q9UJJ7 312 aaKnown RBP-0.14□□□□□ -2.43
SSB-208ENST00000468600 CACNA1SQ13698 1873 aa-0.15□□□□□ -2.43
SSB-208ENST00000468600 IGHV2OR16-5A0A0B4J2B6 119 aa-0.15□□□□□ -2.43
SSB-208ENST00000468600 LOC389332A0A1B0GUA5 103 aa-0.15□□□□□ -2.43
SSB-208ENST00000468600 ARRDC5A6NEK1 342 aa-0.15□□□□□ -2.43
SSB-208ENST00000468600 CATP04040 527 aaKnown RBP-0.15□□□□□ -2.43
SSB-208ENST00000468600 IFNW1P05000 195 aa-0.15□□□□□ -2.43
SSB-208ENST00000468600 GUSBP08236 651 aa-0.15□□□□□ -2.43
SSB-208ENST00000468600 GABRA1P14867 456 aa-0.15□□□□□ -2.43
SSB-208ENST00000468600 CRABP1P29762 137 aa-0.15□□□□□ -2.43
SSB-208ENST00000468600 TAGLN2P37802 199 aaKnown RBP-0.15□□□□□ -2.43
SSB-208ENST00000468600 C5orf64Q2M2E5 130 aa-0.15□□□□□ -2.43
SSB-208ENST00000468600 CDNFQ49AH0 187 aa-0.15□□□□□ -2.43
SSB-208ENST00000468600 ARL6Q9H0F7 186 aa-0.15□□□□□ -2.43
SSB-208ENST00000468600 VPS37BQ9H9H4 285 aa-0.15□□□□□ -2.43
SSB-208ENST00000468600 EXTL2Q9UBQ6 330 aa-0.15□□□□□ -2.43
SSB-208ENST00000468600 ANGPT4Q9Y264 503 aa-0.15□□□□□ -2.43
SSB-208ENST00000468600 ASB3Q9Y575 518 aa-0.15□□□□□ -2.43
SSB-208ENST00000468600 HEY1Q9Y5J3 304 aa-0.15□□□□□ -2.43
SSB-208ENST00000468600 ORC6Q9Y5N6 252 aa-0.15□□□□□ -2.43
SSB-208ENST00000468600 ARHGAP32A7KAX9 2087 aa-0.15□□□□□ -2.43
SSB-208ENST00000468600 IGKV3-7A0A075B6H7 116 aa-0.16□□□□□ -2.44
SSB-208ENST00000468600 IGKV1-9A0A0C4DH69 117 aa-0.16□□□□□ -2.44
SSB-208ENST00000468600 GYG2O15488 501 aa-0.16□□□□□ -2.44
SSB-208ENST00000468600 CACNG3O60359 315 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms