RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 C2CD3Q4AC94 2353 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 A0A1W2PQ09 198 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 SH2D1BO14796 132 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 FCN3O75636 299 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 RGS9O75916 674 aaPredicted RBP13.05□□□□□ -0.32
BRAT1-202ENST00000421712 HTR3BO95264 441 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 HAND1O96004 215 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 SFTPBP07988 381 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 FAM157CP0CG43 387 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 HOXB4P17483 251 aaPredicted RBP13.05□□□□□ -0.32
BRAT1-202ENST00000421712 PSMA1P25786 263 aaKnown RBP13.05□□□□□ -0.32
BRAT1-202ENST00000421712 OR3A4PP47883 348 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 CAV3P56539 151 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 PAX2Q02962 417 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 PAX8Q06710 450 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 SCN1BQ07699 218 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 C11orf91Q3C1V1 193 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 HSD17B12Q53GQ0 312 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 FAM27D1Q5T7N8 215 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 CRIP3Q6Q6R5 217 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 UNQ9370/PRO34162Q6UXP9 181 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 C1QL2Q7Z5L3 287 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 OR10K1Q8NGX5 313 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 FCGR1BQ92637 280 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 SLITRK2Q9H156 845 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 METTL9Q9H1A3 318 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 CNTD2Q9H8S5 307 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 RHOFQ9HBH0 211 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 HMG20AQ9NP66 347 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 IL36RNQ9UBH0 155 aa13.05□□□□□ -0.32
BRAT1-202ENST00000421712 RPUSD1Q9UJJ7 312 aaKnown RBP13.05□□□□□ -0.32
BRAT1-202ENST00000421712 MEGF11A6BM72 1044 aa13.04□□□□□ -0.32
BRAT1-202ENST00000421712 MAGEA13PA6NCF6 341 aa13.04□□□□□ -0.32
BRAT1-202ENST00000421712 CDRT1O95170 752 aa13.04□□□□□ -0.32
BRAT1-202ENST00000421712 CSTBP04080 98 aaKnown RBP13.04□□□□□ -0.32
BRAT1-202ENST00000421712 PPIAL4GP0DN37 164 aa13.04□□□□□ -0.32
BRAT1-202ENST00000421712 GABRR1P24046 479 aa13.04□□□□□ -0.32
BRAT1-202ENST00000421712 BMXP51813 675 aa13.04□□□□□ -0.32
BRAT1-202ENST00000421712 FGF12P61328 243 aa13.04□□□□□ -0.32
BRAT1-202ENST00000421712 KCTD21Q4G0X4 260 aa13.04□□□□□ -0.32
BRAT1-202ENST00000421712 SPIN3Q5JUX0 258 aa13.04□□□□□ -0.32
BRAT1-202ENST00000421712 METTL11BQ5VVY1 283 aa13.04□□□□□ -0.32
BRAT1-202ENST00000421712 C1orf229Q6ZS94 237 aaPredicted RBP13.04□□□□□ -0.32
BRAT1-202ENST00000421712 PXT1Q8NFP0 134 aa13.04□□□□□ -0.32
BRAT1-202ENST00000421712 MUL1Q969V5 352 aa13.04□□□□□ -0.32
BRAT1-202ENST00000421712 PCGF1Q9BSM1 259 aa13.04□□□□□ -0.32
BRAT1-202ENST00000421712 DCTN5Q9BTE1 182 aa13.04□□□□□ -0.32
BRAT1-202ENST00000421712 EXOSC4Q9NPD3 245 aaKnown RBP13.04□□□□□ -0.32
BRAT1-202ENST00000421712 ONECUT1Q9UBC0 465 aa13.04□□□□□ -0.32
BRAT1-202ENST00000421712 OPN4Q9UHM6 478 aa13.04□□□□□ -0.32
BRAT1-202ENST00000421712 TOX4O94842 621 aa13.03□□□□□ -0.32
BRAT1-202ENST00000421712 IFNA2P01563 188 aa13.03□□□□□ -0.32
BRAT1-202ENST00000421712 TK1P04183 234 aa13.03□□□□□ -0.32
BRAT1-202ENST00000421712 ZNF44P15621 663 aa13.03□□□□□ -0.32
BRAT1-202ENST00000421712 SRMP19623 302 aa13.03□□□□□ -0.32
BRAT1-202ENST00000421712 GABRA5P31644 462 aa13.03□□□□□ -0.32
BRAT1-202ENST00000421712 MTNR1BP49286 362 aa13.03□□□□□ -0.32
BRAT1-202ENST00000421712 ARF6P62330 175 aa13.03□□□□□ -0.32
BRAT1-202ENST00000421712 FABP5Q01469 135 aa13.03□□□□□ -0.32
BRAT1-202ENST00000421712 UBE2UQ5VVX9 321 aa13.03□□□□□ -0.32
BRAT1-202ENST00000421712 FAM185AQ8N0U4 392 aa13.03□□□□□ -0.32
BRAT1-202ENST00000421712 NKAIN3Q8N8D7 197 aa13.03□□□□□ -0.32
BRAT1-202ENST00000421712 OR4M1Q8NGD0 313 aa13.03□□□□□ -0.32
BRAT1-202ENST00000421712 PCDHB16Q9NRJ7 776 aa13.03□□□□□ -0.32
BRAT1-202ENST00000421712 ANK3Q12955 4377 aaKnown RBP13.03□□□□□ -0.32
BRAT1-202ENST00000421712 K7N7A8 449 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 SIRPB1O00241 398 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 CCRL2O00421 344 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 DEGS1O15121 323 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 ARL6IP5O75915 188 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 TNFAIP8O95379 198 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 UCHL1P09936 223 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 SERPINA2P20848 420 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 EDDM3BP56851 147 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 SCGB2A2Q13296 93 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 EDDM3AQ14507 147 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 ZNF146Q15072 292 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 PDCD1Q15116 288 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 NEDD8Q15843 81 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 SSX1Q16384 188 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 SLC22A6Q4U2R8 563 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 GLT8D1Q68CQ7 371 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 AWAT2Q6E213 333 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 TMEM91Q6ZNR0 172 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 GDPD3Q7L5L3 318 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 CMTM4Q8IZR5 234 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 OR5D13Q8NGL4 314 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 PPP1R35Q8TAP8 253 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 DACT3Q96B18 629 aaPredicted RBP13.02□□□□□ -0.33
BRAT1-202ENST00000421712 SNX22Q96L94 193 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 CHST6Q9GZX3 395 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 FAM234AQ9H0X4 552 aa13.02□□□□□ -0.33
BRAT1-202ENST00000421712 PPIL3Q9H2H8 161 aaKnown RBP13.02□□□□□ -0.33
BRAT1-202ENST00000421712 MRPS28Q9Y2Q9 187 aaKnown RBP13.02□□□□□ -0.33
BRAT1-202ENST00000421712 SF3B6Q9Y3B4 125 aaKnown RBP13.02□□□□□ -0.33
BRAT1-202ENST00000421712 NSD1Q96L73 2696 aaPredicted RBP13.02□□□□□ -0.33
BRAT1-202ENST00000421712 IGHV3OR16-10A0A075B7F0 116 aa13.01□□□□□ -0.33
BRAT1-202ENST00000421712 SC5DO75845 299 aa13.01□□□□□ -0.33
BRAT1-202ENST00000421712 OR2H2O95918 312 aa13.01□□□□□ -0.33
BRAT1-202ENST00000421712 CALRP27797 417 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms