RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 V9GY05 133 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 MAST4O15021 2626 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 LOC100506127A0A0U1RQW1 187 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 SLC17A2O00624 439 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 DVL1O14640 695 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 SLC22A1O15245 554 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 AIREO43918 545 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 FCN3O75636 299 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 HTR3BO95264 441 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 HAND1O96004 215 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 CSTBP04080 98 aaKnown RBP12.48□□□□□ -0.41
HSPG2-201ENST00000374673 CHRM2P08172 466 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 UBBP0CG47 229 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 RAB3BP20337 219 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 SERPINA2P20848 420 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 ZFP36P26651 326 aaKnown RBP12.48□□□□□ -0.41
HSPG2-201ENST00000374673 HTR2CP28335 458 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 CEBPDP49716 269 aaPredicted RBP12.48□□□□□ -0.41
HSPG2-201ENST00000374673 C11orf91Q3C1V1 193 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 NHLRC3Q5JS37 347 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 FAM166AQ6J272 317 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 TPRA1Q86W33 373 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 OR10K1Q8NGX5 313 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 CENPOQ9BU64 300 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 FUNDC2Q9BWH2 189 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 GLS2Q9UI32 602 aa12.48□□□□□ -0.41
HSPG2-201ENST00000374673 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.48□□□□□ -0.415e-6■■■■□ 22.8
HSPG2-201ENST00000374673 PPIAL4CA0A0B4J2A2 164 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 GPR37O15354 613 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 PHF1O43189 567 aaPredicted RBP12.47□□□□□ -0.41
HSPG2-201ENST00000374673 NDUFB3O43676 98 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 LY6G6DO95868 133 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 TGFAP01135 160 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 CALCBP10092 127 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 SELLP14151 372 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 CFPP27918 469 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 RANBP1P43487 201 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 DVL1P1P54792 670 aaPredicted RBP12.47□□□□□ -0.41
HSPG2-201ENST00000374673 SNU13P55769 128 aaKnown RBP12.47□□□□□ -0.41
HSPG2-201ENST00000374673 CAV3P56539 151 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 LCN2P80188 198 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 COL10A1Q03692 680 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 IL13RA2Q14627 380 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 SLC22A6Q4U2R8 563 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 LRRC10Q5BKY1 277 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 CLEC9AQ6UXN8 241 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 OSR2Q8N2R0 312 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 ZNRF1Q8ND25 227 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 SLC25A28Q96A46 364 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 TMEM186Q96B77 213 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 FAM234AQ9H0X4 552 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 RNF167Q9H6Y7 350 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 PLGRKTQ9HBL7 147 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 LPAR2Q9HBW0 351 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 SLC25A10Q9UBX3 287 aaPredicted RBP12.47□□□□□ -0.41
HSPG2-201ENST00000374673 METRNQ9UJH8 293 aa12.47□□□□□ -0.41
HSPG2-201ENST00000374673 ABCA1O95477 2261 aa12.46□□□□□ -0.41
HSPG2-201ENST00000374673 MALRD1Q5VYJ5 2156 aa12.46□□□□□ -0.41
HSPG2-201ENST00000374673 ARHGAP32A7KAX9 2087 aa12.46□□□□□ -0.41
HSPG2-201ENST00000374673 TRAV20A0A0B4J274 112 aa12.46□□□□□ -0.41
HSPG2-201ENST00000374673 A0A1W2PP11 408 aa12.46□□□□□ -0.41
HSPG2-201ENST00000374673 SH2D1BO14796 132 aa12.46□□□□□ -0.41
HSPG2-201ENST00000374673 ZNF737O75373 536 aa12.46□□□□□ -0.41
HSPG2-201ENST00000374673 GTF2F2P13984 249 aa12.46□□□□□ -0.41
HSPG2-201ENST00000374673 LMO1P25800 156 aa12.46□□□□□ -0.41
HSPG2-201ENST00000374673 DUSP1P28562 367 aa12.46□□□□□ -0.41
HSPG2-201ENST00000374673 RPL5P46777 297 aaKnown RBP12.46□□□□□ -0.41
HSPG2-201ENST00000374673 CAPZA1P52907 286 aa12.46□□□□□ -0.41
HSPG2-201ENST00000374673 OR10A3P58181 314 aa12.46□□□□□ -0.41
HSPG2-201ENST00000374673 IKZF1Q13422 519 aa12.46□□□□□ -0.41
HSPG2-201ENST00000374673 GPR141Q7Z602 305 aa12.46□□□□□ -0.41
HSPG2-201ENST00000374673 GLCCI1Q86VQ1 547 aa12.46□□□□□ -0.41
HSPG2-201ENST00000374673 TMEM185AQ8NFB2 350 aa12.46□□□□□ -0.41
HSPG2-201ENST00000374673 ST8SIA4Q92187 359 aa12.46□□□□□ -0.41
HSPG2-201ENST00000374673 DACT3Q96B18 629 aaPredicted RBP12.46□□□□□ -0.41
HSPG2-201ENST00000374673 MRPS24Q96EL2 167 aaKnown RBP12.46□□□□□ -0.41
HSPG2-201ENST00000374673 GSX1Q9H4S2 264 aaPredicted RBP12.46□□□□□ -0.41
HSPG2-201ENST00000374673 OR5V1Q9UGF6 321 aa12.46□□□□□ -0.41
HSPG2-201ENST00000374673 SCOCQ9UIL1 159 aa12.46□□□□□ -0.41
HSPG2-201ENST00000374673 A0A0G2JK05 382 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 IFITM5A6NNB3 132 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 K7N7A8 449 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 BPNT1O95861 308 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 ECDO95905 644 aaPredicted RBP12.45□□□□□ -0.42
HSPG2-201ENST00000374673 OR2H2O95918 312 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 SDC2P34741 201 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 RBM11P57052 281 aaKnown RBP12.45□□□□□ -0.42
HSPG2-201ENST00000374673 PAX2Q02962 417 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 RAB11BQ15907 218 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 PIGYQ3MUY2 71 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 CD276Q5ZPR3 534 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 Q6P435 159 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 LINC00596Q86U02 117 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 NR2C2APQ86WQ0 139 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 ANKRD13BQ86YJ7 626 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 FGFRL1Q8N441 504 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 CHST4Q8NCG5 386 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 SNX22Q96L94 193 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 CST11Q9H112 138 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 STEAP1Q9UHE8 339 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms