RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 IGHV3-9P01782 118 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 SMIM13P0DJ93 91 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 HRH1P35367 487 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 EDDM3BP56851 147 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 R3HDM4Q96D70 268 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 GABARAPL3Q9BY60 117 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 BANF2Q9H503 90 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 TRAV17A0A0B4J275 112 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 A0A1W2PR48 441 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 MFSD2BA6NFX1 497 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 HPP00738 406 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 RPS23P62266 143 aaKnown RBP12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 CTF1Q16619 201 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 VASH2Q86V25 355 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 OLIG1Q8TAK6 271 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 TIMD4Q96H15 378 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 HSPB9Q9BQS6 159 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 CBLN4Q9NTU7 201 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 TMEM140Q9NV12 185 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 NDRG4Q9ULP0 352 aaKnown RBP12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 SPAARA0A1B0GVQ0 90 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 A0A1B0GWA3 101 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 LRRC30A6NM36 301 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 LYZL6O75951 148 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 CLEC18BQ6UXF7 455 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 SLC16A11Q8NCK7 471 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 COMMD5Q9GZQ3 224 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 SBF2Q86WG5 1849 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 IGHV1OR21-1A0A087WYE8 117 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 TRBV5-4A0A0C4DH59 114 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 CKS1BP61024 79 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 GNB1P62873 340 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 SFTPA1Q8IWL2 248 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 C5orf17Q8NAS9 161 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 C19orf53Q9UNZ5 99 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 EFSO43281 561 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 HOXC4P09017 264 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 ZNF250P15622 560 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 A0A1B0GWB2 263 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 CST7O76096 145 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 LGALS4P56470 323 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 ZNF766Q5HY98 468 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 LURAP1LQ8IV03 231 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 GPBAR1Q8TDU6 330 aa12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 DUSP15Q9H1R2 295 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF1-202ENST00000372190 KCNAB3O43448 404 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 RIPPLY2Q5TAB7 128 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 NUFIP2Q7Z417 695 aaKnown RBP12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 CDCA4Q9BXL8 241 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 PPT2Q9UMR5 302 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 COL4A1P02462 1669 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 SNURFLB1AK76 121 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 SLC25A17O43808 307 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 SMPD2O60906 423 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 RNF224P0DH78 156 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 GLI4P10075 376 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 RAG2P55895 527 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 SYT14P1Q58G82 188 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 LHFPL4Q7Z7J7 247 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 EGLN1Q9GZT9 426 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 TCRBV5S2A0A599 114 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 CA1P00915 261 aaPredicted RBP12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 LIPFP07098 398 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 LINC00303Q3SY05 128 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 OR4F17Q8NGA8 305 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 MS4A3Q96HJ5 214 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 DNAJC4Q9NNZ3 241 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 WDR90Q96KV7 1748 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 PPICP45877 212 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 DUSP5Q16690 384 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 H1FNTQ75WM6 255 aaPredicted RBP12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 DOK3Q7L591 496 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 SMIM4Q8WVI0 70 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 KIAA1456Q9P272 454 aa12.55□□□□□ -0.4
RAPGEF1-202ENST00000372190 WDFY1Q8IWB7 410 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 CPEB3Q8NE35 698 aaKnown RBP12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 OR10AD1Q8NGE0 317 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 ZNF71Q9NQZ8 489 aaPredicted RBP12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 M0R1B8 84 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 GFRA3O60609 400 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 HIST1H1BP16401 226 aaKnown RBP12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 SKP2Q13309 424 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 ANKRD55Q3KP44 614 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 PLA2G3Q9NZ20 509 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 ZNF785A8K8V0 405 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 SDCBPO00560 298 aaPredicted RBP12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 ICOSLGO75144 302 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 SSPNQ14714 243 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 TCTN3Q6NUS6 607 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 YIPF6Q96EC8 236 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 OR2A14Q96R47 310 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 C1QTNF3Q9BXJ4 246 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 TAS2R4Q9NYW5 299 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 ATAD5Q96QE3 1844 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 TCRBV16S1A1N1A0A5B0 115 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 PATE3B3GLJ2 98 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 MT-ATP6P00846 226 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 PI3P19957 117 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 PNLIPRP2P54317 469 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 MEF2CQ06413 473 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms