RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 ACSM1Q08AH1 577 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 MRPL28Q13084 256 aaKnown RBP11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 CDK5R1Q15078 307 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 KLHL22Q53GT1 634 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 OR8H2Q8N162 312 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 ZNF555Q8NEP9 628 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 OR51A2Q8NGJ7 313 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 OR5D18Q8NGL1 313 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 DYRK2Q92630 601 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 EMG1Q92979 244 aaKnown RBP11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 ZCCHC4Q9H5U6 513 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 C8orf4Q9NR00 106 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 MEX3AA1L020 520 aaKnown RBP11.87□□□□□ -0.51
PPP1CA-201ENST00000312989 FBP1P09467 338 aa11.87□□□□□ -0.51
PPP1CA-201ENST00000312989 PIPP12273 146 aaPredicted RBP11.87□□□□□ -0.51
PPP1CA-201ENST00000312989 PAX6P26367 422 aa11.87□□□□□ -0.51
PPP1CA-201ENST00000312989 DCKP27707 260 aa11.87□□□□□ -0.51
PPP1CA-201ENST00000312989 OR3A1P47881 315 aa11.87□□□□□ -0.51
PPP1CA-201ENST00000312989 KRTAP10-3P60369 221 aa11.87□□□□□ -0.51
PPP1CA-201ENST00000312989 IL18R1Q13478 541 aa11.87□□□□□ -0.51
PPP1CA-201ENST00000312989 TTC23Q5W5X9 447 aa11.87□□□□□ -0.51
PPP1CA-201ENST00000312989 Q8IYB0 196 aa11.87□□□□□ -0.51
PPP1CA-201ENST00000312989 FAM58AQ8N1B3 248 aa11.87□□□□□ -0.51
PPP1CA-201ENST00000312989 ASCC1Q8N9N2 400 aaKnown RBP11.87□□□□□ -0.51
PPP1CA-201ENST00000312989 BEND2Q8NDZ0 799 aa11.87□□□□□ -0.51
PPP1CA-201ENST00000312989 OR4S1Q8NGB4 309 aa11.87□□□□□ -0.51
PPP1CA-201ENST00000312989 OR5D13Q8NGL4 314 aa11.87□□□□□ -0.51
PPP1CA-201ENST00000312989 SNX22Q96L94 193 aa11.87□□□□□ -0.51
PPP1CA-201ENST00000312989 COMMD4Q9H0A8 199 aa11.87□□□□□ -0.51
PPP1CA-201ENST00000312989 NKX1-2Q9UD57 310 aaPredicted RBP11.87□□□□□ -0.51
PPP1CA-201ENST00000312989 CAB39Q9Y376 341 aaPredicted RBP11.87□□□□□ -0.51
PPP1CA-201ENST00000312989 MEGF8Q7Z7M0 2845 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 MGAM2Q2M2H8 2515 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 MEIOCA2RUB1 952 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 FAM90A8PA6NJQ4 464 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 ODF3BA8MYP8 253 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 H0YAE9 185 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 OGG1O15527 345 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 SULT1B1O43704 296 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 CCDC159P0C7I6 412 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 LMO1P25800 156 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 BMXP51813 675 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 GBX2P52951 348 aaPredicted RBP11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 RPL15P61313 204 aaKnown RBP11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 RPS11P62280 158 aaKnown RBP eCLIP11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 CCDC58Q4VC31 144 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 MIDNQ504T8 468 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 SPIN3Q5JUX0 258 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 Q6P435 159 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 DYNAPQ8N1N2 210 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 TPRX1Q8N7U7 411 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 OR5AK2Q8NH90 309 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 TBC1D15Q8TC07 691 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 PIFOQ8TCI5 191 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 CYGBQ8WWM9 190 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 WFDC12Q8WWY7 111 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 GGHQ92820 318 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 MRPL48Q96GC5 212 aaKnown RBP11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 PGLYRP3Q96LB9 341 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 CHST6Q9GZX3 395 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 VPREB3Q9UKI3 123 aa11.86□□□□□ -0.51
PPP1CA-201ENST00000312989 POM121CA8CG34 1229 aa11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 OR2H2O95918 312 aa11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 EEF1B2P24534 225 aaKnown RBP11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 RAG2P55895 527 aa11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 SRSF4Q08170 494 aaKnown RBP11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 BLMHQ13867 455 aa11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 KISS1Q15726 138 aa11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 DMKNQ6E0U4 476 aaPredicted RBP11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 RPL22L1Q6P5R6 122 aaKnown RBP11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 SHISA2Q6UWI4 295 aa11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 ZNF782Q6ZMW2 699 aaPredicted RBP11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 SERPINA12Q8IW75 414 aa11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 SAXO1Q8IYX7 474 aa11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 DHRSXQ8N5I4 330 aa11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 Q8NFD4 153 aa11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 OR13C5Q8NGS8 318 aa11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 HAVCR2Q8TDQ0 301 aa11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 NKX3-1Q99801 234 aaPredicted RBP11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 MEGF9Q9H1U4 602 aa11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 FKBP14Q9NWM8 211 aa11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 TAS2R4Q9NYW5 299 aa11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 DHDHQ9UQ10 334 aa11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 SF3B6Q9Y3B4 125 aaKnown RBP11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 HSPE1-MOB4S4R3N1 261 aa11.85□□□□□ -0.51
PPP1CA-201ENST00000312989 TRBV5-5A0A0J9YX44 114 aa11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 GABRPO00591 440 aa11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 XPNPEP2O43895 674 aa11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 MMP23AO75900 390 aa11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 RBP4P02753 201 aa11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 ZNF728P0DKX0 622 aa11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 PRKACAP17612 351 aa11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 CAPGP40121 348 aa11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 SNU13P55769 128 aaKnown RBP11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 PRR31Q5SQ13 230 aa11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 Q6ZSV7 163 aa11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 LHFPL4Q7Z7J7 247 aa11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 ZSCAN4Q8NAM6 433 aaPredicted RBP11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 OR52N1Q8NH53 320 aa11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 LINC01006Q8NI28 216 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms