RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 TEX12Q9BXU0 123 aa13.35□□□□□ -0.27
SSH1-208ENST00000548522 RANBP3Q9H6Z4 567 aaPredicted RBP13.35□□□□□ -0.27
SSH1-208ENST00000548522 ZNF702PQ9H963 129 aa13.35□□□□□ -0.27
SSH1-208ENST00000548522 MPC1Q9Y5U8 109 aa13.35□□□□□ -0.27
SSH1-208ENST00000548522 SNTNA6NMZ2 147 aa13.34□□□□□ -0.27
SSH1-208ENST00000548522 ADARB2-AS1A8MUL3 147 aa13.34□□□□□ -0.27
SSH1-208ENST00000548522 CST4P01036 141 aa13.34□□□□□ -0.27
SSH1-208ENST00000548522 GLRA1P23415 457 aa13.34□□□□□ -0.27
SSH1-208ENST00000548522 COX7A1P24310 79 aa13.34□□□□□ -0.27
SSH1-208ENST00000548522 GPM6AP51674 278 aa13.34□□□□□ -0.27
SSH1-208ENST00000548522 FAM76BQ5HYJ3 339 aa13.34□□□□□ -0.27
SSH1-208ENST00000548522 C11orf88Q6PI97 169 aa13.34□□□□□ -0.27
SSH1-208ENST00000548522 DYNAPQ8N1N2 210 aa13.34□□□□□ -0.27
SSH1-208ENST00000548522 OR2T33Q8NG76 320 aa13.34□□□□□ -0.27
SSH1-208ENST00000548522 OR5D13Q8NGL4 314 aa13.34□□□□□ -0.27
SSH1-208ENST00000548522 SGCDQ92629 289 aa13.34□□□□□ -0.27
SSH1-208ENST00000548522 PHF21AQ96BD5 680 aa13.34□□□□□ -0.27
SSH1-208ENST00000548522 CCDC90BQ9GZT6 254 aa13.34□□□□□ -0.27
SSH1-208ENST00000548522 FAM234AQ9H0X4 552 aa13.34□□□□□ -0.27
SSH1-208ENST00000548522 MEGF9Q9H1U4 602 aa13.34□□□□□ -0.27
SSH1-208ENST00000548522 SERTAD4Q9NUC0 356 aa13.34□□□□□ -0.27
SSH1-208ENST00000548522 MRPS18AQ9NVS2 196 aaKnown RBP13.34□□□□□ -0.27
SSH1-208ENST00000548522 KLHDC2Q9Y2U9 406 aa13.34□□□□□ -0.27
SSH1-208ENST00000548522 RPL36Q9Y3U8 105 aaKnown RBP13.34□□□□□ -0.27
SSH1-208ENST00000548522 COL7A1Q02388 2944 aa13.34□□□□□ -0.27
SSH1-208ENST00000548522 TRBV23-1A0A0A0MS06 115 aa13.33□□□□□ -0.28
SSH1-208ENST00000548522 H3BN98 237 aa13.33□□□□□ -0.28
SSH1-208ENST00000548522 FBXO24O75426 580 aa13.33□□□□□ -0.28
SSH1-208ENST00000548522 LOXL3P58215 753 aa13.33□□□□□ -0.28
SSH1-208ENST00000548522 SMN1Q16637 294 aaKnown RBP13.33□□□□□ -0.28
SSH1-208ENST00000548522 CEP78Q5JTW2 689 aa13.33□□□□□ -0.28
SSH1-208ENST00000548522 AHSA2Q719I0 299 aa13.33□□□□□ -0.28
SSH1-208ENST00000548522 ZNF367Q7RTV3 350 aa13.33□□□□□ -0.28
SSH1-208ENST00000548522 LHFPL4Q7Z7J7 247 aa13.33□□□□□ -0.28
SSH1-208ENST00000548522 TIGD4Q8IY51 512 aa13.33□□□□□ -0.28
SSH1-208ENST00000548522 ZDHHC23Q8IYP9 409 aa13.33□□□□□ -0.28
SSH1-208ENST00000548522 FTMTQ8N4E7 242 aa13.33□□□□□ -0.28
SSH1-208ENST00000548522 C11orf42Q8N5U0 333 aa13.33□□□□□ -0.28
SSH1-208ENST00000548522 OR8B12Q8NGG6 310 aa13.33□□□□□ -0.28
SSH1-208ENST00000548522 TEX47Q8TBZ9 253 aa13.33□□□□□ -0.28
SSH1-208ENST00000548522 OTULINQ96BN8 352 aa13.33□□□□□ -0.28
SSH1-208ENST00000548522 FUNDC2Q9BWH2 189 aa13.33□□□□□ -0.28
SSH1-208ENST00000548522 NPFFR1Q9GZQ6 430 aa13.33□□□□□ -0.28
SSH1-208ENST00000548522 RGCCQ9H4X1 137 aa13.33□□□□□ -0.28
SSH1-208ENST00000548522 NECAP2Q9NVZ3 263 aa13.33□□□□□ -0.28
SSH1-208ENST00000548522 RIIAD1A6NNX1 92 aa13.32□□□□□ -0.28
SSH1-208ENST00000548522 SELENOFO60613 162 aa13.32□□□□□ -0.28
SSH1-208ENST00000548522 INMTO95050 263 aa13.32□□□□□ -0.28
SSH1-208ENST00000548522 H2BFMP0C1H6 154 aa13.32□□□□□ -0.28
SSH1-208ENST00000548522 CCL3L1P16619 93 aa13.32□□□□□ -0.28
SSH1-208ENST00000548522 ZNF3P17036 446 aa13.32□□□□□ -0.28
SSH1-208ENST00000548522 CEBPDP49716 269 aaPredicted RBP13.32□□□□□ -0.28
SSH1-208ENST00000548522 RAB13P51153 203 aa13.32□□□□□ -0.28
SSH1-208ENST00000548522 CAPZA1P52907 286 aa13.32□□□□□ -0.28
SSH1-208ENST00000548522 CCBE1Q6UXH8 406 aaPredicted RBP13.32□□□□□ -0.28
SSH1-208ENST00000548522 SLC16A12Q6ZSM3 486 aa13.32□□□□□ -0.28
SSH1-208ENST00000548522 TMEM219Q86XT9 240 aa13.32□□□□□ -0.28
SSH1-208ENST00000548522 STX19Q8N4C7 294 aa13.32□□□□□ -0.28
SSH1-208ENST00000548522 PPP1R14AQ96A00 147 aa13.32□□□□□ -0.28
SSH1-208ENST00000548522 R3HDM4Q96D70 268 aa13.32□□□□□ -0.28
SSH1-208ENST00000548522 ZNF488Q96MN9 340 aa13.32□□□□□ -0.28
SSH1-208ENST00000548522 OR5M11Q96RB7 305 aa13.32□□□□□ -0.28
SSH1-208ENST00000548522 CITED2Q99967 270 aaPredicted RBP13.32□□□□□ -0.28
SSH1-208ENST00000548522 OR51I2Q9H344 312 aa13.32□□□□□ -0.28
SSH1-208ENST00000548522 RAB18Q9NP72 206 aa13.32□□□□□ -0.28
SSH1-208ENST00000548522 CMC2Q9NRP2 79 aa13.32□□□□□ -0.28
SSH1-208ENST00000548522 WARS2Q9UGM6 360 aaKnown RBP13.32□□□□□ -0.28
SSH1-208ENST00000548522 IFNGP01579 166 aa13.31□□□□□ -0.28
SSH1-208ENST00000548522 APOC1P02654 83 aa13.31□□□□□ -0.28
SSH1-208ENST00000548522 HMGN1P05114 100 aa13.31□□□□□ -0.28
SSH1-208ENST00000548522 BLVRAP53004 296 aa13.31□□□□□ -0.28
SSH1-208ENST00000548522 AANATQ16613 207 aa13.31□□□□□ -0.28
SSH1-208ENST00000548522 CTF1Q16619 201 aa13.31□□□□□ -0.28
SSH1-208ENST00000548522 TMEM95Q3KNT9 176 aa13.31□□□□□ -0.28
SSH1-208ENST00000548522 TMEM200BQ69YZ2 307 aa13.31□□□□□ -0.28
SSH1-208ENST00000548522 ZNF782Q6ZMW2 699 aaPredicted RBP13.31□□□□□ -0.28
SSH1-208ENST00000548522 CD177Q8N6Q3 437 aa13.31□□□□□ -0.28
SSH1-208ENST00000548522 OR4M1Q8NGD0 313 aa13.31□□□□□ -0.28
SSH1-208ENST00000548522 WIPF2Q8TF74 440 aaPredicted RBP13.31□□□□□ -0.28
SSH1-208ENST00000548522 SDSLQ96GA7 329 aa13.31□□□□□ -0.28
SSH1-208ENST00000548522 OR51V1Q9H2C8 321 aa13.31□□□□□ -0.28
SSH1-208ENST00000548522 BAIAP2Q9UQB8 552 aa13.31□□□□□ -0.28
SSH1-208ENST00000548522 MEX3AA1L020 520 aaKnown RBP13.3□□□□□ -0.28
SSH1-208ENST00000548522 ZNF732B4DXR9 585 aa13.3□□□□□ -0.28
SSH1-208ENST00000548522 GLCEO94923 617 aa13.3□□□□□ -0.28
SSH1-208ENST00000548522 FADS2O95864 444 aaKnown RBP13.3□□□□□ -0.28
SSH1-208ENST00000548522 PSMA6P60900 246 aaKnown RBP13.3□□□□□ -0.28
SSH1-208ENST00000548522 ST3GAL4Q11206 333 aa13.3□□□□□ -0.28
SSH1-208ENST00000548522 ZNF273Q14593 569 aa13.3□□□□□ -0.28
SSH1-208ENST00000548522 GINS1Q14691 196 aa13.3□□□□□ -0.28
SSH1-208ENST00000548522 LDLRAD2Q5SZI1 272 aa13.3□□□□□ -0.28
SSH1-208ENST00000548522 HAGHLQ6PII5 290 aaPredicted RBP13.3□□□□□ -0.28
SSH1-208ENST00000548522 Q6ZS46 218 aa13.3□□□□□ -0.28
SSH1-208ENST00000548522 BATF2Q8N1L9 274 aa13.3□□□□□ -0.28
SSH1-208ENST00000548522 OR4S1Q8NGB4 309 aa13.3□□□□□ -0.28
SSH1-208ENST00000548522 OTOSQ8NHW6 89 aa13.3□□□□□ -0.28
SSH1-208ENST00000548522 TMEM163Q8TC26 289 aa13.3□□□□□ -0.28
SSH1-208ENST00000548522 AQP3Q92482 292 aa13.3□□□□□ -0.28
SSH1-208ENST00000548522 ABCB9Q9NP78 766 aa13.3□□□□□ -0.28
SSH1-208ENST00000548522 TENM3Q9P273 2699 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms