RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 NUDT16L1Q9BRJ7 211 aaKnown RBP6.68□□□□□ -1.34
SSBP3-211ENST00000528787 TMEM59Q9BXS4 323 aa6.68□□□□□ -1.34
SSBP3-211ENST00000528787 DCSTAMPQ9H295 470 aa6.68□□□□□ -1.34
SSBP3-211ENST00000528787 IFT22Q9H7X7 185 aa6.68□□□□□ -1.34
SSBP3-211ENST00000528787 CNTD2Q9H8S5 307 aa6.68□□□□□ -1.34
SSBP3-211ENST00000528787 HES4Q9HCC6 221 aa6.68□□□□□ -1.34
SSBP3-211ENST00000528787 DIABLOQ9NR28 239 aa6.68□□□□□ -1.34
SSBP3-211ENST00000528787 CCDC59Q9P031 241 aaKnown RBP6.68□□□□□ -1.34
SSBP3-211ENST00000528787 KAAG1Q9UBP8 84 aa6.68□□□□□ -1.34
SSBP3-211ENST00000528787 AK6Q9Y3D8 172 aaKnown RBP6.68□□□□□ -1.34
SSBP3-211ENST00000528787 A3GALT2U3KPV4 340 aa6.68□□□□□ -1.34
SSBP3-211ENST00000528787 DOCK11Q5JSL3 2073 aa6.68□□□□□ -1.34
SSBP3-211ENST00000528787 UNC79Q9P2D8 2635 aa6.68□□□□□ -1.34
SSBP3-211ENST00000528787 DCHS2Q6V1P9 2916 aa6.68□□□□□ -1.34
SSBP3-211ENST00000528787 NAV2Q8IVL1 2488 aa6.68□□□□□ -1.34
SSBP3-211ENST00000528787 CELSR2Q9HCU4 2923 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 OR2AT4A6NND4 320 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 NDUFB3O43676 98 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 FOXH1O75593 365 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 CRTAPO75718 401 aaPredicted RBP6.67□□□□□ -1.34
SSBP3-211ENST00000528787 HTR3BO95264 441 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 PLATP00750 562 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 LIPFP07098 398 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 RPS2P15880 293 aaKnown RBP6.67□□□□□ -1.34
SSBP3-211ENST00000528787 PRKACAP17612 351 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 SERPINA2P20848 420 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 USF1P22415 310 aaPredicted RBP6.67□□□□□ -1.34
SSBP3-211ENST00000528787 ANOS1P23352 680 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 GATA3P23771 443 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 COL8A2P25067 703 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 S100A5P33763 92 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 TALDO1P37837 337 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 NR4A2P43354 598 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 ERVK11-1P61568 191 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 IL13RA1P78552 427 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 CTF1Q16619 201 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 SLC22A6Q4U2R8 563 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 TMEM255AQ5JRV8 349 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 ACP7Q6ZNF0 438 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 CALHM1Q8IU99 346 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 GCSAMQ8N6F7 178 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 ZNF525Q8N782 197 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 RAB40AQ8WXH6 277 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 DVL3Q92997 716 aaPredicted RBP6.67□□□□□ -1.34
SSBP3-211ENST00000528787 SLAMF9Q96A28 289 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 ISOC1Q96CN7 298 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 NEIL1Q96FI4 390 aaPredicted RBP6.67□□□□□ -1.34
SSBP3-211ENST00000528787 S100A16Q96FQ6 103 aaKnown RBP6.67□□□□□ -1.34
SSBP3-211ENST00000528787 NEDD4LQ96PU5 975 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 BARHL1Q9BZE3 327 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 RIMS4Q9H426 269 aaPredicted RBP6.67□□□□□ -1.34
SSBP3-211ENST00000528787 LIN7BQ9HAP6 207 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 HMG20AQ9NP66 347 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 MGAT4AQ9UM21 535 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 SPATA2Q9UM82 520 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 ST3GAL6Q9Y274 331 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 WIPI2Q9Y4P8 454 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 LRBAP50851 2863 aa6.67□□□□□ -1.34
SSBP3-211ENST00000528787 HRNRQ86YZ3 2850 aaPredicted RBP6.67□□□□□ -1.34
SSBP3-211ENST00000528787 TRBV23-1A0A0A0MS06 115 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 MCRIP1C9JLW8 97 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 DEGS1O15121 323 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 TMPRSS2O15393 492 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 SPRY1O43609 319 aaPredicted RBP6.66□□□□□ -1.34
SSBP3-211ENST00000528787 SYNGR1O43759 233 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 HAND1O96004 215 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 IGHV2-70P01814 119 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 MGMTP16455 207 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 PMELP40967 661 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 GABRA2P47869 451 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 OR3A4PP47883 348 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 GZMKP49863 264 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 CAV3P56539 151 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 RBM11P57052 281 aaKnown RBP6.66□□□□□ -1.34
SSBP3-211ENST00000528787 KRTAP10-9P60411 292 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 VBP1P61758 197 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 LSM3P62310 102 aaKnown RBP6.66□□□□□ -1.34
SSBP3-211ENST00000528787 GNB2P62879 340 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 PITPNAQ00169 270 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 MXD1Q05195 221 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 LOXL1Q08397 574 aaPredicted RBP6.66□□□□□ -1.34
SSBP3-211ENST00000528787 SCGB2A2Q13296 93 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 P2RY14Q15391 338 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 IDNKQ5T6J7 187 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 FAM27D1Q5T7N8 215 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 TRAT1Q6PIZ9 186 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 BAIAP2L2Q6UXY1 529 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 DNM1P46Q6ZS02 220 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 GDPD3Q7L5L3 318 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 WDR86Q86TI4 376 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 C11orf53Q8IXP5 236 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 BOLLQ8N9W6 283 aaKnown RBP6.66□□□□□ -1.34
SSBP3-211ENST00000528787 OR5D18Q8NGL1 313 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 GTF3AQ92664 365 aaKnown RBP6.66□□□□□ -1.34
SSBP3-211ENST00000528787 FAM46BQ96A09 425 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 SDSLQ96GA7 329 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 SNX22Q96L94 193 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 SPACA5Q96QH8 159 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 LIME1Q9H400 295 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 NCOR1P1Q9H4R4 102 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms