RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 SYNGR4O95473 234 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 ACTL6AO96019 429 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 NRASP01111 189 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 IGHV3-9P01782 118 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 TMEM225BP0DP42 221 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 RRASP10301 218 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 AMY2BP19961 511 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 CHATP28329 748 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 AGTR1P30556 359 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 RBP2P50120 134 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 FUT6P51993 359 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 ATP1B3P54709 279 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 IL13RA1P78552 427 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 SRYQ05066 204 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 PDZK1IP1Q13113 114 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 ZNF345Q14585 488 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 RNPS1Q15287 305 aaKnown RBP5.54□□□□□ -1.52
SPEN-204ENST00000471538 SURF2Q15527 256 aaPredicted RBP5.54□□□□□ -1.52
SPEN-204ENST00000471538 TMEM128Q5BJH2 165 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 ATP1A1-AS1Q5TC04 95 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 ZNF660Q6AZW8 331 aaPredicted RBP5.54□□□□□ -1.52
SPEN-204ENST00000471538 THOC7Q6I9Y2 204 aaKnown RBP5.54□□□□□ -1.52
SPEN-204ENST00000471538 LIN54Q6MZP7 749 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 C11orf87Q6NUJ2 197 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 RPUSD3Q6P087 351 aaKnown RBP5.54□□□□□ -1.52
SPEN-204ENST00000471538 GSG1LQ6UXU4 331 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 C6orf201Q7Z4U5 140 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 KCNRGQ8N5I3 272 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 Q8NFD4 153 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 ANGPTL6Q8NI99 470 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 SCARB1Q8WTV0 552 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 BORCS8Q96FH0 119 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 TECTBQ96PL2 329 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 CITED4Q96RK1 184 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 S100A13Q99584 98 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 MFFQ9GZY8 342 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 ARL6Q9H0F7 186 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 MED9Q9NWA0 146 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 PARPBPQ9NWS1 579 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 ZNF581Q9P0T4 197 aa5.54□□□□□ -1.52
SPEN-204ENST00000471538 RELNP78509 3460 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 TRBV6-7A0A0A0MS04 114 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 A0A0D9SG52 128 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 FAM230AA0A1W2PPH8 454 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 PQLC2LA1A4F0 135 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 KLRC4-KLRK1H3BQV0 150 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 OR2F2O95006 317 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 HTR3BO95264 441 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 SERPINA5P05154 406 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 CRHP06850 196 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 NMBP08949 121 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 LYL1P12980 280 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 ZNF24P17028 368 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 AKR1C4P17516 323 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 DTYMKP23919 212 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 GABRR1P24046 479 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 PMELP40967 661 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 NPY4RP50391 375 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 PPIAP62937 165 aaKnown RBP5.53□□□□□ -1.52
SPEN-204ENST00000471538 PLGLB1Q02325 96 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 OR2F1Q13607 317 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 TGIF1Q15583 401 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 C3AR1Q16581 482 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 TOR2AQ5JU69 321 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 RGS7BPQ6MZT1 257 aaPredicted RBP5.53□□□□□ -1.52
SPEN-204ENST00000471538 CLEC18BQ6UXF7 455 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 Q6ZPA2 131 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 RFPL4BQ6ZWI9 263 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 NUFIP2Q7Z417 695 aaKnown RBP5.53□□□□□ -1.52
SPEN-204ENST00000471538 SLC51BQ86UW2 128 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 COMMD7Q86VX2 200 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 TMEM17Q86X19 198 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 ZSCAN4Q8NAM6 433 aaPredicted RBP5.53□□□□□ -1.52
SPEN-204ENST00000471538 CSNK2A3Q8NEV1 391 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 PPP1R1CQ8WVI7 109 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 PCNPQ8WW12 178 aaKnown RBP5.53□□□□□ -1.52
SPEN-204ENST00000471538 HPSE2Q8WWQ2 592 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 EDARADDQ8WWZ3 215 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 MAFIPQ8WZ33 124 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 APH1AQ96BI3 265 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 MRPS24Q96EL2 167 aaKnown RBP5.53□□□□□ -1.52
SPEN-204ENST00000471538 POM121Q96HA1 1249 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 WDYHV1Q96HA8 205 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 POM121L2Q96KW2 1035 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 SCGB3A2Q96PL1 93 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 DMRTA2Q96SC8 542 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 SULT4A1Q9BR01 284 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 HDHD3Q9BSH5 251 aaPredicted RBP5.53□□□□□ -1.52
SPEN-204ENST00000471538 ST6GALNAC5Q9BVH7 336 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 REG4Q9BYZ8 158 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 PRRG4Q9BZD6 226 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 NMES1Q9C002 83 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 WDR13Q9H1Z4 485 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 PPA2Q9H2U2 334 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 ZDHHC11Q9H8X9 412 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 CALHM2Q9HA72 323 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 ELL3Q9HB65 397 aaPredicted RBP5.53□□□□□ -1.52
SPEN-204ENST00000471538 RAB18Q9NP72 206 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 EHFQ9NZC4 300 aa5.53□□□□□ -1.52
SPEN-204ENST00000471538 CRIM1Q9NZV1 1036 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms