RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 STMN3Q9NZ72 180 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 ZNF229Q9UJW7 825 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 WIF1Q9Y5W5 379 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 A2ML1A8K2U0 1454 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 CNTLNQ9NXG0 1405 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 ABCA9Q8IUA7 1624 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 BIVM-ERCC5R4GMW8 1640 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 COL1A2P08123 1366 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 TMEM94Q12767 1356 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 KDM5DQ9BY66 1539 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 ATP10BO94823 1461 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 A0A0G2JMP0 313 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 A0A0X1KG70 313 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 ZNF879B4DU55 563 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 M0R1B8 84 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 LGALS9O00182 355 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 GATCO43716 136 aaKnown RBP2□□□□□ -2.09
TRAPPC13-204ENST00000438419 SC5DO75845 299 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 VAPBO95292 243 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 APOA1P02647 267 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 MAS1P04201 325 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 ELF3P78545 371 aaPredicted RBP2□□□□□ -2.09
TRAPPC13-204ENST00000438419 MAD2L1BPQ15013 274 aaPredicted RBP2□□□□□ -2.09
TRAPPC13-204ENST00000438419 PMVKQ15126 192 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 VAMP3Q15836 100 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 FAM222AQ5U5X8 452 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 PDPNQ86YL7 162 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 RBM45Q8IUH3 476 aaKnown RBP2□□□□□ -2.09
TRAPPC13-204ENST00000438419 ST13P4Q8IZP2 240 aaPredicted RBP2□□□□□ -2.09
TRAPPC13-204ENST00000438419 ORMDL3Q8N138 153 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 CA13Q8N1Q1 262 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 SYS1Q8N2H4 156 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 STK40Q8N2I9 435 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 ATPAF2Q8N5M1 289 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 SLC25A29Q8N8R3 303 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 OR4D6Q8NGJ1 314 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 NT5CQ8TCD5 201 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 CDKL2Q92772 493 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 ADTRPQ96IZ2 230 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 ZFP3Q96NJ6 502 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 IP6K3Q96PC2 410 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 RHOXF2Q9BQY4 288 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 COPS4Q9BT78 406 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 TMED9Q9BVK6 235 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 RAB1BQ9H0U4 201 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 SYT4Q9H2B2 425 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 SLC38A1Q9H2H9 487 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 SDHAF2Q9NX18 166 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 SLC7A11Q9UPY5 501 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 DIP2AQ14689 1571 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 DHX57Q6P158 1386 aaKnown RBP1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 BAHCC1Q9P281 2608 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 MED14O60244 1454 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 IGKV1D-17A0A075B6S4 117 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 A8MUU9 505 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 A8MWL6 223 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 E7EWF7 191 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 RNF113AO15541 343 aaKnown RBP1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 DHRS3O75911 302 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 IGKV1-17P01599 117 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 CD5P06127 495 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 CCL2P13500 99 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 ZNF14P17017 642 aaPredicted RBP1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 HLA-GP17693 338 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 BGNP21810 368 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 LCN1P31025 176 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 CASQ1P31415 396 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 TGFBR1P36897 503 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 RANBP1P43487 201 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 GPR4P46093 362 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 FUT5Q11128 374 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 BTN1A1Q13410 526 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 MAPRE2Q15555 327 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 CDNFQ49AH0 187 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 DNLZQ5SXM8 178 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 MED27Q6P2C8 311 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 SETD3Q86TU7 594 aaPredicted RBP1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 BBS7Q8IWZ6 715 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 SPANXA2-OT1Q8N9U9 137 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 ST20-AS1Q8NBB2 130 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 OR6K2Q8NGY2 324 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 ZNF420Q8TAQ5 688 aaPredicted RBP1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 METTL26Q96S19 204 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 ZNF302Q9NR11 478 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 CA10Q9NS85 328 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 DDIT4Q9NX09 232 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 RAB22AQ9UL26 194 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 AP3M1Q9Y2T2 418 aa1.99□□□□□ -2.09
TRAPPC13-204ENST00000438419 SPHKAPQ2M3C7 1700 aa1.98□□□□□ -2.09
TRAPPC13-204ENST00000438419 TOP2AP11388 1531 aaKnown RBP1.98□□□□□ -2.09
TRAPPC13-204ENST00000438419 ABCC1P33527 1531 aa1.98□□□□□ -2.09
TRAPPC13-204ENST00000438419 MAP3K1Q13233 1512 aa1.98□□□□□ -2.09
TRAPPC13-204ENST00000438419 ERICH3Q5RHP9 1530 aa1.98□□□□□ -2.09
TRAPPC13-204ENST00000438419 A2MP01023 1474 aa1.98□□□□□ -2.09
TRAPPC13-204ENST00000438419 CAMSAP2Q08AD1 1489 aa1.98□□□□□ -2.09
TRAPPC13-204ENST00000438419 DEPDC5O75140 1603 aa1.98□□□□□ -2.09
TRAPPC13-204ENST00000438419 KIF14Q15058 1648 aa1.98□□□□□ -2.09
TRAPPC13-204ENST00000438419 MGAT4DA6NG13 374 aa1.98□□□□□ -2.09
TRAPPC13-204ENST00000438419 IGKV1-39P01597 117 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms