RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 HSD17B12Q53GQ0 312 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 WDR25Q64LD2 544 aaPredicted RBP15.59■□□□□ 0.09
SSU72-203ENST00000378725 C1QL2Q7Z5L3 287 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 LRRTM1Q86UE6 522 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 BATF2Q8N1L9 274 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 MUL1Q969V5 352 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 TMEM186Q96B77 213 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 SDSLQ96GA7 329 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 MED30Q96HR3 178 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 GAFA1Q96PS6 74 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 GPER1Q99527 375 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 LPAR2Q9HBW0 351 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 SMURF1Q9HCE7 757 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 TCF7L1Q9HCS4 588 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 YAE1D1Q9NRH1 226 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 CLN8Q9UBY8 286 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 TRDV1A0A1B0GX56 115 aa15.58■□□□□ 0.08
SSU72-203ENST00000378725 A8MV72 311 aaPredicted RBP15.58■□□□□ 0.08
SSU72-203ENST00000378725 SIGLEC5O15389 551 aa15.58■□□□□ 0.08
SSU72-203ENST00000378725 PHF1O43189 567 aaPredicted RBP15.58■□□□□ 0.08
SSU72-203ENST00000378725 ADRA2CP18825 462 aa15.58■□□□□ 0.08
SSU72-203ENST00000378725 PRDX2P32119 198 aa15.58■□□□□ 0.08
SSU72-203ENST00000378725 LCN2P80188 198 aa15.58■□□□□ 0.08
SSU72-203ENST00000378725 C11orf91Q3C1V1 193 aa15.58■□□□□ 0.08
SSU72-203ENST00000378725 Q71RC1 249 aaPredicted RBP15.58■□□□□ 0.08
SSU72-203ENST00000378725 GLCCI1Q86VQ1 547 aa15.58■□□□□ 0.08
SSU72-203ENST00000378725 FAM58AQ8N1B3 248 aa15.58■□□□□ 0.08
SSU72-203ENST00000378725 CD177Q8N6Q3 437 aa15.58■□□□□ 0.08
SSU72-203ENST00000378725 Q8NFD4 153 aa15.58■□□□□ 0.08
SSU72-203ENST00000378725 TNFAIP8L1Q8WVP5 186 aa15.58■□□□□ 0.08
SSU72-203ENST00000378725 HMG20AQ9NP66 347 aa15.58■□□□□ 0.08
SSU72-203ENST00000378725 RBFOX1Q9NWB1 397 aaKnown RBP15.58■□□□□ 0.08
SSU72-203ENST00000378725 HIF1ANQ9NWT6 349 aa15.58■□□□□ 0.08
SSU72-203ENST00000378725 MAB21L2Q9Y586 359 aa15.58■□□□□ 0.08
SSU72-203ENST00000378725 A0A1B0GW55 424 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 DVL1O14640 695 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 ARL6IP5O75915 188 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 TFF1P04155 84 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 SFTPBP07988 381 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 DUX4L2P0CJ85 424 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 DUX4L3P0CJ86 424 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 DUX4L4P0CJ87 422 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 DUX4L5P0CJ88 424 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 DUX4L6P0CJ89 424 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 DUX4L7P0CJ90 424 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 JUNBP17275 347 aaPredicted RBP15.57■□□□□ 0.08
SSU72-203ENST00000378725 GABRA2P47869 451 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 OR3A4PP47883 348 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 PAX2Q02962 417 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 NEDD8Q15843 81 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 ELP2Q6IA86 826 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 DUX4L9Q6RFH8 374 aaPredicted RBP15.57■□□□□ 0.08
SSU72-203ENST00000378725 FAM216BQ8N7L0 139 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 NKAIN3Q8N8D7 197 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 EMG1Q92979 244 aaKnown RBP15.57■□□□□ 0.08
SSU72-203ENST00000378725 TMEM160Q9NX00 188 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 DUX4Q9UBX2 424 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 KCNS2Q9ULS6 477 aa15.57■□□□□ 0.08
SSU72-203ENST00000378725 NKX6-3A6NJ46 265 aa15.56■□□□□ 0.08
SSU72-203ENST00000378725 NDUFB3O43676 98 aa15.56■□□□□ 0.08
SSU72-203ENST00000378725 BMXP51813 675 aa15.56■□□□□ 0.08
SSU72-203ENST00000378725 IL13RA1P78552 427 aa15.56■□□□□ 0.08
SSU72-203ENST00000378725 ZNF146Q15072 292 aa15.56■□□□□ 0.08
SSU72-203ENST00000378725 DGUOKQ16854 277 aa15.56■□□□□ 0.08
SSU72-203ENST00000378725 ZNF561Q8N587 486 aa15.56■□□□□ 0.08
SSU72-203ENST00000378725 PNLDC1Q8NA58 520 aaKnown RBP15.56■□□□□ 0.08
SSU72-203ENST00000378725 DACT3Q96B18 629 aaPredicted RBP15.56■□□□□ 0.08
SSU72-203ENST00000378725 NKX3-1Q99801 234 aaPredicted RBP15.56■□□□□ 0.08
SSU72-203ENST00000378725 UQCC2Q9BRT2 126 aa15.56■□□□□ 0.08
SSU72-203ENST00000378725 CNTD2Q9H8S5 307 aa15.56■□□□□ 0.08
SSU72-203ENST00000378725 MMP26Q9NRE1 261 aa15.56■□□□□ 0.08
SSU72-203ENST00000378725 IL36GQ9NZH8 169 aa15.56■□□□□ 0.08
SSU72-203ENST00000378725 GPR37O15354 613 aa15.55■□□□□ 0.08
SSU72-203ENST00000378725 GATA3P23771 443 aa15.55■□□□□ 0.08
SSU72-203ENST00000378725 MTNR1BP49286 362 aa15.55■□□□□ 0.08
SSU72-203ENST00000378725 LRRC10Q5BKY1 277 aa15.55■□□□□ 0.08
SSU72-203ENST00000378725 SPIN3Q5JUX0 258 aa15.55■□□□□ 0.08
SSU72-203ENST00000378725 CD276Q5ZPR3 534 aa15.55■□□□□ 0.08
SSU72-203ENST00000378725 RAB40AQ8WXH6 277 aa15.55■□□□□ 0.08
SSU72-203ENST00000378725 FOXRED1Q96CU9 486 aaPredicted RBP15.55■□□□□ 0.08
SSU72-203ENST00000378725 SLITRK2Q9H156 845 aa15.55■□□□□ 0.08
SSU72-203ENST00000378725 METTL9Q9H1A3 318 aa15.55■□□□□ 0.08
SSU72-203ENST00000378725 IL36RNQ9UBH0 155 aa15.55■□□□□ 0.08
SSU72-203ENST00000378725 OR5V1Q9UGF6 321 aa15.55■□□□□ 0.08
SSU72-203ENST00000378725 METRNQ9UJH8 293 aa15.55■□□□□ 0.08
SSU72-203ENST00000378725 ING4Q9UNL4 249 aa15.55■□□□□ 0.08
SSU72-203ENST00000378725 LOC105371242A0A075B767 164 aa15.54■□□□□ 0.08
SSU72-203ENST00000378725 CDRT1O95170 752 aa15.54■□□□□ 0.08
SSU72-203ENST00000378725 ECDO95905 644 aaPredicted RBP15.54■□□□□ 0.08
SSU72-203ENST00000378725 CHRM2P08172 466 aa15.54■□□□□ 0.08
SSU72-203ENST00000378725 SELLP14151 372 aa15.54■□□□□ 0.08
SSU72-203ENST00000378725 PRKACAP17612 351 aa15.54■□□□□ 0.08
SSU72-203ENST00000378725 CALRP27797 417 aaKnown RBP15.54■□□□□ 0.08
SSU72-203ENST00000378725 FGF9P31371 208 aaPredicted RBP15.54■□□□□ 0.08
SSU72-203ENST00000378725 CEBPDP49716 269 aaPredicted RBP15.54■□□□□ 0.08
SSU72-203ENST00000378725 CAV3P56539 151 aa15.54■□□□□ 0.08
SSU72-203ENST00000378725 FGF12P61328 243 aa15.54■□□□□ 0.08
SSU72-203ENST00000378725 IKZF1Q13422 519 aa15.54■□□□□ 0.08
SSU72-203ENST00000378725 GLT8D1Q68CQ7 371 aa15.54■□□□□ 0.08
SSU72-203ENST00000378725 FIP1L1Q6UN15 594 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms