RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 DCKP27707 260 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 GABRA2P47869 451 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 DOC2BQ14184 412 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 SMIM21Q3B7S5 101 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 ASPHD2Q6ICH7 369 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 C9orf139Q6ZV77 190 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 BPIFB2Q8N4F0 458 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 ZNF676Q8N7Q3 588 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 ZDHHC22Q8N966 263 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 PNLDC1Q8NA58 520 aaKnown RBP9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 ZNF485Q8NCK3 441 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 DNAAF1Q8NEP3 725 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 OR13C3Q8NGS6 347 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 SPATA3Q8NHX4 192 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 C8orf46Q8TAG6 207 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 ZNF418Q8TF45 676 aaPredicted RBP9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 GGHQ92820 318 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 SDSLQ96GA7 329 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 MRPL48Q96GC5 212 aaKnown RBP9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 C1orf147Q96MC9 270 aaPredicted RBP9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 WDFY2Q96P53 400 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 PCGF1Q9BSM1 259 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 DCTN5Q9BTE1 182 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 SLC25A10Q9UBX3 287 aaPredicted RBP9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 SLC7A11Q9UPY5 501 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 POLDIP2Q9Y2S7 368 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 SIRT4Q9Y6E7 314 aaPredicted RBP9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 TMEM212A6NML5 194 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 GPR37O15354 613 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 RRP9O43818 475 aaKnown RBP9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 TOX4O94842 621 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 NXPH2O95156 264 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 SERPINA3P01011 423 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 PIPP12273 146 aaPredicted RBP9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 ZNF20P17024 532 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 ATF1P18846 271 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 AZGP1P25311 298 aaKnown RBP9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 GBX2P52951 348 aaPredicted RBP9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 AQP4P55087 323 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 CAV3P56539 151 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 ARF6P62330 175 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 MRPL28Q13084 256 aaKnown RBP9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 CDK5R1Q15078 307 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 CNN3Q15417 329 aaKnown RBP9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 LRRC10Q5BKY1 277 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 RUSC1-AS1Q66K80 236 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 BRD3OSQ6XYD6 125 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 SLC25A26Q70HW3 274 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 C8orf59Q8N0T1 100 aaPredicted RBP9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 Q8N7P7 452 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 SIGLECL1Q8N7X8 197 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 OR13C9Q8NGT0 318 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 OR5AK2Q8NH90 309 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 SLAMF9Q96A28 289 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 BORCS8Q96FH0 119 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 MED30Q96HR3 178 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 MYCBPQ99417 103 aaPredicted RBP9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 SUCNR1Q9BXA5 334 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 CNTD2Q9H8S5 307 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 IL36RNQ9UBH0 155 aa9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 CAB39Q9Y376 341 aaPredicted RBP9.05□□□□□ -0.96
SHKBP1-206ENST00000595523 FBN3Q75N90 2809 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 TRBV2A0A0J9YWF9 115 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 CENPVL3A0A0U1RRI6 287 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 MDFIC2A0A1B0GVS7 189 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 IRGMA1A4Y4 181 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 INMTO95050 263 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 MT-ND2P03891 347 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 CCDC159P0C7I6 412 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 FPR2P25090 351 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 PRDX2P32119 198 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 NPBWR2P48146 333 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 RBP2P50120 134 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 DLX1P56177 255 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 ST3GAL4Q11206 333 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 METTL11BQ5VVY1 283 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 PARP16Q8N5Y8 322 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 TMEM185AQ8NFB2 350 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 H1FXQ92522 213 aaKnown RBP9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 TMEM80Q96HE8 168 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 CEP19Q96LK0 163 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 OPALINQ96PE5 141 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 SPACA5Q96QH8 159 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 PLCXD1Q9NUJ7 323 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 FKBP14Q9NWM8 211 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 PSORS1C1Q9UIG5 152 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 EXOSC1Q9Y3B2 195 aaKnown RBP9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 KPTNQ9Y664 436 aa9.04□□□□□ -0.96
SHKBP1-206ENST00000595523 NBEAL1Q6ZS30 2694 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 PKD1L1Q8TDX9 2849 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 IGKV1-12A0A0C4DH73 117 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 EFCAB10A6NFE3 127 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 DNAJC9-AS1A6NH13 148 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 OGG1O15527 345 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 SPRY1O43609 319 aaPredicted RBP9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 KNG1P01042 644 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 IGKV1D-12P01611 117 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 NDUFB7P17568 137 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 PRKACBP22694 351 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms