RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 IL13RA1P78552 427 aa16.61■□□□□ 0.25
SS18-218ENST00000581021 ST3GAL4Q11206 333 aa16.61■□□□□ 0.25
SS18-218ENST00000581021 MRPL28Q13084 256 aaKnown RBP16.61■□□□□ 0.25
SS18-218ENST00000581021 CDK5R1Q15078 307 aa16.61■□□□□ 0.25
SS18-218ENST00000581021 SMIM21Q3B7S5 101 aa16.61■□□□□ 0.25
SS18-218ENST00000581021 ZNRF1Q8ND25 227 aa16.61■□□□□ 0.25
SS18-218ENST00000581021 LY6G5BQ8NDX9 201 aa16.61■□□□□ 0.25
SS18-218ENST00000581021 OR13C9Q8NGT0 318 aa16.61■□□□□ 0.25
SS18-218ENST00000581021 OR5AK2Q8NH90 309 aa16.61■□□□□ 0.25
SS18-218ENST00000581021 SLAMF9Q96A28 289 aa16.61■□□□□ 0.25
SS18-218ENST00000581021 SDSLQ96GA7 329 aa16.61■□□□□ 0.25
SS18-218ENST00000581021 SIRPDQ9H106 197 aa16.61■□□□□ 0.25
SS18-218ENST00000581021 FKBP14Q9NWM8 211 aa16.61■□□□□ 0.25
SS18-218ENST00000581021 RASL12Q9NYN1 266 aa16.61■□□□□ 0.25
SS18-218ENST00000581021 EXOSC1Q9Y3B2 195 aaKnown RBP16.61■□□□□ 0.25
SS18-218ENST00000581021 TRBV2A0A0J9YWF9 115 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 IRGMA1A4Y4 181 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 RFPL4AA6NLU0 287 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 ZNF879B4DU55 563 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 RFPL4AL1F8VTS6 287 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 INMTO95050 263 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 NXPH2O95156 264 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 CCDC159P0C7I6 412 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 C21orf33P30042 268 aaPredicted RBP16.6■□□□□ 0.25
SS18-218ENST00000581021 GABRA2P47869 451 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 CNN3Q15417 329 aaKnown RBP16.6■□□□□ 0.25
SS18-218ENST00000581021 SLC25A26Q70HW3 274 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 AHSA2Q719I0 299 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 DNAAF1Q8NEP3 725 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 GATAD2BQ8WXI9 593 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 SGCDQ92629 289 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 BORCS8Q96FH0 119 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 ZNF48Q96MX3 618 aaPredicted RBP16.6■□□□□ 0.25
SS18-218ENST00000581021 SPACA5Q96QH8 159 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 MYCBPQ99417 103 aaPredicted RBP16.6■□□□□ 0.25
SS18-218ENST00000581021 DCTN5Q9BTE1 182 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 ESM1Q9NQ30 184 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 PLCXD1Q9NUJ7 323 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 IL36RNQ9UBH0 155 aa16.6■□□□□ 0.25
SS18-218ENST00000581021 SLC25A10Q9UBX3 287 aaPredicted RBP16.6■□□□□ 0.25
SS18-218ENST00000581021 EFCAB10A6NFE3 127 aa16.59■□□□□ 0.25
SS18-218ENST00000581021 ECDO95905 644 aaPredicted RBP16.59■□□□□ 0.25
SS18-218ENST00000581021 SERPINA3P01011 423 aa16.59■□□□□ 0.25
SS18-218ENST00000581021 MYL12AP19105 171 aa16.59■□□□□ 0.25
SS18-218ENST00000581021 ARF6P62330 175 aa16.59■□□□□ 0.25
SS18-218ENST00000581021 LRRC10Q5BKY1 277 aa16.59■□□□□ 0.25
SS18-218ENST00000581021 ZFP41Q8N8Y5 198 aa16.59■□□□□ 0.25
SS18-218ENST00000581021 BPIFB6Q8NFQ5 453 aa16.59■□□□□ 0.25
SS18-218ENST00000581021 OR13C5Q8NGS8 318 aa16.59■□□□□ 0.25
SS18-218ENST00000581021 OR52N1Q8NH53 320 aa16.59■□□□□ 0.25
SS18-218ENST00000581021 RFT1Q96AA3 541 aa16.59■□□□□ 0.25
SS18-218ENST00000581021 WDFY2Q96P53 400 aa16.59■□□□□ 0.25
SS18-218ENST00000581021 PCGF1Q9BSM1 259 aa16.59■□□□□ 0.25
SS18-218ENST00000581021 BABAM2Q9NXR7 383 aa16.59■□□□□ 0.25
SS18-218ENST00000581021 CNOT2Q9NZN8 540 aaKnown RBP16.59■□□□□ 0.25
SS18-218ENST00000581021 H0YJX3 145 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 OGG1O15527 345 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 NPBWR2P48146 333 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 RBP2P50120 134 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 DLX1P56177 255 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 HILS1P60008 231 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 PRB3Q04118 309 aaPredicted RBP16.58■□□□□ 0.24
SS18-218ENST00000581021 C11orf91Q3C1V1 193 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 CCDC58Q4VC31 144 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 RPL22L1Q6P5R6 122 aaKnown RBP16.58■□□□□ 0.24
SS18-218ENST00000581021 BRD3OSQ6XYD6 125 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 TMPRSS11AQ6ZMR5 421 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 BPIFB2Q8N4F0 458 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 PARP16Q8N5Y8 322 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 PNLDC1Q8NA58 520 aaKnown RBP16.58■□□□□ 0.24
SS18-218ENST00000581021 TMEM185AQ8NFB2 350 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 C8orf46Q8TAG6 207 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 TMEM158Q8WZ71 300 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 SPSB1Q96BD6 273 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 MED30Q96HR3 178 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 CEP19Q96LK0 163 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 OPALINQ96PE5 141 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 COMMD4Q9H0A8 199 aa16.58■□□□□ 0.24
SS18-218ENST00000581021 PAK1IP1Q9NWT1 392 aaPredicted RBP16.58■□□□□ 0.24
SS18-218ENST00000581021 IGKV1-12A0A0C4DH73 117 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 SPRY1O43609 319 aaPredicted RBP16.57■□□□□ 0.24
SS18-218ENST00000581021 IGKV1D-12P01611 117 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 MT-ND2P03891 347 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 LIPFP07098 398 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 PRKACBP22694 351 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 PRDX2P32119 198 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 SOX2P48431 317 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 POU3F4P49335 361 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 MTCP1P56278 107 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 CAV3P56539 151 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 SCGB2A2Q13296 93 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 RUSC1-AS1Q66K80 236 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 ZNF529Q6P280 563 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 USP43Q70EL4 1123 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 Q8N7P7 452 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 SIGLECL1Q8N7X8 197 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 OR51A2Q8NGJ7 313 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 HAVCR2Q8TDQ0 301 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 TSEN15Q8WW01 171 aaKnown RBP16.57■□□□□ 0.24
SS18-218ENST00000581021 H1FXQ92522 213 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms