RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 OR51F2Q8NH61 342 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 TEAD3Q99594 435 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 PDCD1LG2Q9BQ51 273 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 IQCGQ9H095 443 aaKnown RBP1.68□□□□□ -2.14
PALB2-203ENST00000565038 EXO5Q9H790 373 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 DDX18Q9NVP1 670 aaKnown RBP1.68□□□□□ -2.14
PALB2-203ENST00000565038 MRPL22Q9NWU5 206 aaKnown RBP1.68□□□□□ -2.14
PALB2-203ENST00000565038 ZNF407Q9C0G0 2248 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 MAP3K5Q99683 1374 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 TTC41PQ6P2S7 1318 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 KNDC1Q76NI1 1749 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 ARHGEF28Q8N1W1 1705 aaKnown RBP1.67□□□□□ -2.14
PALB2-203ENST00000565038 NWD2Q9ULI1 1742 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 MARF1Q9Y4F3 1742 aaKnown RBP1.67□□□□□ -2.14
PALB2-203ENST00000565038 CRYBG1Q9Y4K1 1723 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 LOC102724200A0A096LPH7 203 aaPredicted RBP1.67□□□□□ -2.14
PALB2-203ENST00000565038 IGKV1-6A0A0C4DH72 117 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 NCF1BA6NI72 391 aaPredicted RBP1.67□□□□□ -2.14
PALB2-203ENST00000565038 NCF1CA8MVU1 366 aaPredicted RBP1.67□□□□□ -2.14
PALB2-203ENST00000565038 IGKV1-39P01597 117 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 IGKV1D-39P04432 117 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 FGF4P08620 206 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 MMP7P09237 267 aaPredicted RBP1.67□□□□□ -2.14
PALB2-203ENST00000565038 OR8G3PP0DMU2 310 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 GSTM3P21266 225 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 RPS15AP62244 130 aaKnown RBP1.67□□□□□ -2.14
PALB2-203ENST00000565038 MEF2CQ06413 473 aaPredicted RBP1.67□□□□□ -2.14
PALB2-203ENST00000565038 SLC9A3R2Q15599 337 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 DEFB115Q30KQ5 88 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 ZNF678Q5SXM1 525 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 TMEM220Q6QAJ8 160 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 SSX9Q7RTT3 188 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 CA5BP1Q8WTZ4 195 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 MTG1Q9BT17 334 aaPredicted RBP1.67□□□□□ -2.14
PALB2-203ENST00000565038 EMC6Q9BV81 110 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 ZNF302Q9NR11 478 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 CA10Q9NS85 328 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 C20orf96Q9NUD7 363 aaPredicted RBP1.67□□□□□ -2.14
PALB2-203ENST00000565038 ASF1BQ9NVP2 202 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 HMGXB4Q9UGU5 601 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 ADCY9O60503 1353 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 PXDNLA1KZ92 1463 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 MYOM1P52179 1685 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 MYO16Q9Y6X6 1858 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 TRIP11Q15643 1979 aa1.67□□□□□ -2.14
PALB2-203ENST00000565038 LRRC37A3O60309 1634 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 TRPM1Q7Z4N2 1603 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 NUP188Q5SRE5 1749 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 ABCA3Q99758 1704 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 TNS1Q9HBL0 1735 aaKnown RBP1.66□□□□□ -2.14
PALB2-203ENST00000565038 ARPC4-TTLL3A0A0A6YYG9 625 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 GOLGA8TH3BQL2 631 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 BCKDKO14874 412 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 ERI3O43414 337 aaKnown RBP1.66□□□□□ -2.14
PALB2-203ENST00000565038 CACNG3O60359 315 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 IGKV5-2P06315 115 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 MPIP34949 423 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 CCT6AP40227 531 aaKnown RBP1.66□□□□□ -2.14
PALB2-203ENST00000565038 PSMD8P48556 350 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 ACOT2P49753 483 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 GZMMP51124 257 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 TTC19Q6DKK2 380 aaPredicted RBP1.66□□□□□ -2.14
PALB2-203ENST00000565038 ZFAND6Q6FIF0 208 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 APOBEC3HQ6NTF7 200 aaKnown RBP1.66□□□□□ -2.14
PALB2-203ENST00000565038 ANGPTL8Q6UXH0 198 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 WDR82Q6UXN9 313 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 TMCO2Q7Z6W1 182 aaPredicted RBP1.66□□□□□ -2.14
PALB2-203ENST00000565038 RAB43Q86YS6 212 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 KATNAL2Q8IYT4 538 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 GPR21Q99679 349 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 SFXN3Q9BWM7 321 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 MS4A8Q9BY19 250 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 DUSP21Q9H596 190 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 RPRD1BQ9NQG5 326 aaKnown RBP1.66□□□□□ -2.14
PALB2-203ENST00000565038 PXMP2Q9NR77 195 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 CHRAC1Q9NRG0 131 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 RAB22AQ9UL26 194 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 TBC1D24Q9ULP9 559 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 ZNF257Q9Y2Q1 563 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 RTL1A6NKG5 1358 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 RGPD2P0DJD1 1756 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 CASZ1Q86V15 1759 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 SBF2Q86WG5 1849 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 PHLPP2Q6ZVD8 1323 aa1.66□□□□□ -2.14
PALB2-203ENST00000565038 TOPAZ1Q8N9V7 1692 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 FAM208AQ9UK61 1670 aaKnown RBP1.65□□□□□ -2.15
PALB2-203ENST00000565038 KIF24Q5T7B8 1368 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 ABCC12Q96J65 1359 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 CCDC22O60826 627 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 DEDDO75618 318 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 FCN3O75636 299 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 TDP2O95551 362 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 NRASP01111 189 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 HRASP01112 189 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 KRASP01116 189 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 IGHV1-46P01743 117 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 HLA-HP01893 362 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 IFNW1P05000 195 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 STAG3L3P0CL85 134 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 MAGEA1P43355 309 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms