RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 RPSAP08865 295 aaKnown RBP12.63□□□□□ -0.39
SNRPA1-213ENST00000560856 MMP9P14780 707 aa12.63□□□□□ -0.39
SNRPA1-213ENST00000560856 ZNF20P17024 532 aa12.63□□□□□ -0.39
SNRPA1-213ENST00000560856 AZGP1P25311 298 aaKnown RBP12.63□□□□□ -0.39
SNRPA1-213ENST00000560856 RBP2P50120 134 aa12.63□□□□□ -0.39
SNRPA1-213ENST00000560856 CNN3Q15417 329 aaKnown RBP12.63□□□□□ -0.39
SNRPA1-213ENST00000560856 ZNF529Q6P280 563 aa12.63□□□□□ -0.39
SNRPA1-213ENST00000560856 BTNL3Q6UXE8 466 aa12.63□□□□□ -0.39
SNRPA1-213ENST00000560856 BTN2A1Q7KYR7 527 aa12.63□□□□□ -0.39
SNRPA1-213ENST00000560856 CD177Q8N6Q3 437 aa12.63□□□□□ -0.39
SNRPA1-213ENST00000560856 SGCDQ92629 289 aa12.63□□□□□ -0.39
SNRPA1-213ENST00000560856 BORCS8Q96FH0 119 aa12.63□□□□□ -0.39
SNRPA1-213ENST00000560856 SDSLQ96GA7 329 aa12.63□□□□□ -0.39
SNRPA1-213ENST00000560856 MRI1Q9BV20 369 aa12.63□□□□□ -0.39
SNRPA1-213ENST00000560856 ANKRD60Q9BZ19 345 aa12.63□□□□□ -0.39
SNRPA1-213ENST00000560856 COMMD4Q9H0A8 199 aa12.63□□□□□ -0.39
SNRPA1-213ENST00000560856 RPUSD1Q9UJJ7 312 aaKnown RBP12.63□□□□□ -0.39
SNRPA1-213ENST00000560856 RFPL4AA6NLU0 287 aa12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 RFPL4AL1F8VTS6 287 aa12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 SLC1A7O00341 560 aa12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 ECDO95905 644 aaPredicted RBP12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 EPHA1P21709 976 aa12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 PRKACBP22694 351 aa12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 IL13RA1P78552 427 aa12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 RNLSQ5VYX0 342 aa12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 IZUMO2Q6UXV1 221 aa12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 BATF2Q8N1L9 274 aa12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 STX19Q8N4C7 294 aa12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 NANOGP1Q8N7R0 232 aa12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 OR13C9Q8NGT0 318 aa12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 ST8SIA4Q92187 359 aa12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 SPSB1Q96BD6 273 aa12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 SMIM19Q96E16 107 aa12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 MED30Q96HR3 178 aa12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 OPALINQ96PE5 141 aa12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 ZCCHC4Q9H5U6 513 aa12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 PAK1IP1Q9NWT1 392 aaPredicted RBP12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 CHCHD3Q9NX63 227 aaKnown RBP12.62□□□□□ -0.39
SNRPA1-213ENST00000560856 GPR37O15354 613 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 NDUFB3O43676 98 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 NXPH2O95156 264 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 CDK1P06493 297 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 LIPFP07098 398 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 PRDX2P32119 198 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 GABRA2P47869 451 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 ATP1B3P54709 279 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 MTCP1P56278 107 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 CAV3P56539 151 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 FGF12P61328 243 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 RPS11P62280 158 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 SRSF2Q01130 221 aaKnown RBP12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 IKZF1Q13422 519 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 MED21Q13503 144 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 SMIM21Q3B7S5 101 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 LHFPL2Q6ZUX7 228 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 SLC25A26Q70HW3 274 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 ZFP41Q8N8Y5 198 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 ZNRF1Q8ND25 227 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 C8orf46Q8TAG6 207 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 PGLYRP3Q96LB9 341 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 SPACA5Q96QH8 159 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 DCTN5Q9BTE1 182 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 SIRPDQ9H106 197 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 VCX3BQ9H321 246 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 DHDHQ9UQ10 334 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 ZNF281Q9Y2X9 895 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 PCDHGB5Q9Y5G0 923 aa12.61□□□□□ -0.39
SNRPA1-213ENST00000560856 DNHD1Q96M86 4753 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 IGKV1-12A0A0C4DH73 117 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 TRBV5-5A0A0J9YX44 114 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 NKX6-3A6NJ46 265 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 ZNF879B4DU55 563 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 PLATP00750 562 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 IGKV1D-12P01611 117 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 IGHV4-38-2P0DP08 117 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 NPBWR2P48146 333 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 SOX2P48431 317 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 CEBPDP49716 269 aaPredicted RBP12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 SLC35A2P78381 396 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 PDZK1IP1Q13113 114 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 IRF3Q14653 427 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 LRRC10Q5BKY1 277 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 SERPINA12Q8IW75 414 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 PNLDC1Q8NA58 520 aaKnown RBP12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 OR5D14Q8NGL3 314 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 GPR148Q8TDV2 347 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 GHSRQ92847 366 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 SLAMF9Q96A28 289 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 CEP19Q96LK0 163 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 DMRTB1Q96MA1 342 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 TBX15Q96SF7 602 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 CDCA4Q9BXL8 241 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 DUSP21Q9H596 190 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 CNTD2Q9H8S5 307 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 SLC25A10Q9UBX3 287 aaPredicted RBP12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 ZNF69Q9UC07 566 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 NUP50Q9UKX7 468 aa12.6□□□□□ -0.39
SNRPA1-213ENST00000560856 PTGES3LE9PB15 166 aa12.59□□□□□ -0.39
SNRPA1-213ENST00000560856 SPRY1O43609 319 aaPredicted RBP12.59□□□□□ -0.39
SNRPA1-213ENST00000560856 SULT1B1O43704 296 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms