RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 C14orf119Q9NWQ9 140 aa12.13□□□□□ -0.47
USP11-207ENST00000478596 ZDHHC8Q9ULC8 765 aa12.13□□□□□ -0.47
USP11-207ENST00000478596 IGHV3-64DA0A0J9YX35 117 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 TRBV5-5A0A0J9YX44 114 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 FAM230AA0A1W2PPH8 454 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 CCDC160A6NGH7 325 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 C17orf100A8MU93 164 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 F5H5P2 479 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 SULT1B1O43704 296 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 GMDSO60547 372 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 ARL6IP5O75915 188 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 CST4P01036 141 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 RAB3AP20336 220 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 GADD45AP24522 165 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 CALRP27797 417 aaKnown RBP12.12□□□□□ -0.47
USP11-207ENST00000478596 RPL5P46777 297 aaKnown RBP12.12□□□□□ -0.47
USP11-207ENST00000478596 SRP9P49458 86 aaKnown RBP12.12□□□□□ -0.47
USP11-207ENST00000478596 MMP15P51511 669 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 FABP5Q01469 135 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 INSL4Q14641 139 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 PCGF3Q3KNV8 242 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 OLFML2AQ68BL7 652 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 BCL6BQ8N143 479 aaPredicted RBP12.12□□□□□ -0.47
USP11-207ENST00000478596 BORCS8Q96FH0 119 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 CPNE2Q96FN4 548 aaPredicted RBP12.12□□□□□ -0.47
USP11-207ENST00000478596 DERL3Q96Q80 235 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 ZCCHC4Q9H5U6 513 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 GSTK1Q9Y2Q3 226 aa12.12□□□□□ -0.47
USP11-207ENST00000478596 TANC2Q9HCD6 1990 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 hCG_1807616A0A1W2PRN6 198 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 H0YL77 283 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 AIREO43918 545 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 TSPAN15O95858 294 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 IGHV1-46P01743 117 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 IGHV2-5P01817 119 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 PRKACBP22694 351 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 GPM6AP51674 278 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 CCL8P80075 99 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 TAF9Q16594 264 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 DMRTC1Q5HYR2 192 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 C22orf42Q6IC83 251 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 Q6ZR03 302 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 SATL1Q86VE3 508 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 SPERTQ8NA61 448 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 OR13F1Q8NGS4 319 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 ORAI1Q96D31 301 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 RNF170Q96K19 258 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 OR2V2Q96R30 315 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 GPER1Q99527 375 aa12.11□□□□□ -0.47
USP11-207ENST00000478596 PPIAL4EA0A075B759 164 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 PPIAL4CA0A0B4J2A2 164 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 OR5B21A6NL26 309 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 PPIAL4DF5H284 164 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 G3V4G9 280 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 MLNRO43193 412 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 PLATP00750 562 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 MAS1P04201 325 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 GRPP07492 148 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 PPIAL4FP0DN26 164 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 ATF1P18846 271 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 TNFRSF1AP19438 455 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 FSTP19883 344 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 AZGP1P25311 298 aaKnown RBP12.1□□□□□ -0.47
USP11-207ENST00000478596 TGFBR2P37173 567 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 POU3F4P49335 361 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 KRTAP10-3P60369 221 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 RPS11P62280 158 aaKnown RBP eCLIP12.1□□□□□ -0.47
USP11-207ENST00000478596 LSM3P62310 102 aaKnown RBP12.1□□□□□ -0.47
USP11-207ENST00000478596 FAM209AQ5JX71 171 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 FAM27D1Q5T7N8 215 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 DDI2Q5TDH0 399 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 GPR107Q5VW38 600 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 UTS2BQ765I0 119 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 PARP16Q8N5Y8 322 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 OR1M1Q8NGA1 313 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 ITLN1Q8WWA0 313 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 FUNDC2Q9BWH2 189 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 FAM192AQ9GZU8 254 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 OR51E2Q9H255 320 aa12.1□□□□□ -0.47
USP11-207ENST00000478596 WNK2Q9Y3S1 2297 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 TRBV5-7A0A0A0MS05 114 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 TRDV1A0A1B0GX56 115 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 ZNF732B4DXR9 585 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 NCR1O76036 304 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 PRB2P02812 416 aaPredicted RBP12.09□□□□□ -0.47
USP11-207ENST00000478596 IRF2P14316 349 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 BDKRB2P30411 391 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 ATP1B3P54709 279 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 RAG2P55895 527 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 LOXL3P58215 753 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 GNG3P63215 75 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 CEACAM21Q3KPI0 293 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 KLF17Q5JT82 389 aaPredicted RBP12.09□□□□□ -0.47
USP11-207ENST00000478596 PRAMEF6Q5VXH4 476 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 LHFPL2Q6ZUX7 228 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 CLVS1Q8IUQ0 354 aaPredicted RBP12.09□□□□□ -0.47
USP11-207ENST00000478596 JAGN1Q8N5M9 183 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 PNLDC1Q8NA58 520 aaKnown RBP12.09□□□□□ -0.47
USP11-207ENST00000478596 OR11L1Q8NGX0 322 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 MRAPQ8TCY5 172 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms