RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ZMYND19Q96E35 227 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 Q96MT0 163 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 FAM210AQ96ND0 272 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 HBEGFQ99075 208 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 RDH14Q9HBH5 336 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 TMEM27Q9HBJ8 222 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 TMEM100Q9NV29 134 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 THSD7AQ9UPZ6 1657 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 ARHGEF10O15013 1369 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 PALLDQ8WX93 1383 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 KIAA0232Q92628 1395 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 MARF1Q9Y4F3 1742 aaKnown RBP3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 CCDC144AA2RUR9 1427 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 TNS3Q68CZ2 1445 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 RRBP1Q9P2E9 1410 aaKnown RBP3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 LMTK2Q8IWU2 1503 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 MTCL1Q9Y4B5 1905 aaKnown RBP3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 IGHV3-74A0A0B4J1X5 117 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 IGKV1-8A0A0C4DH67 115 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 PLAC8L1A1L4L8 177 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 J3QLI3 93 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 FABP7O15540 132 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 MPZL2O60487 215 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 GLSO94925 669 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 SEMA3DO95025 777 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 MPZL1O95297 269 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 RAB36O95755 333 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 ORM1P02763 201 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 HLA-DPB1P04440 258 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 MMP7P09237 267 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 KLK2P20151 261 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 CXCR1P25024 350 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 PAX6P26367 422 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 PSMB5P28074 263 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 HOXA9P31269 272 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 BNIP2Q12982 314 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 MADCAM1Q13477 382 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 CAPRIN1Q14444 709 aaKnown RBP3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 GINS1Q14691 196 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 HERPUD1Q15011 391 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 FBXW9Q5XUX1 488 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 PAGE2Q7Z2X7 111 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 DCXRQ7Z4W1 244 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 TGIF2LYQ8IUE0 185 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 C12orf56Q8IXR9 622 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 PRSS58Q8IYP2 241 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 C19orf18Q8NEA5 215 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 CDS1Q92903 461 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 OR2M2Q96R28 347 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 ABCB9Q9NP78 766 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 USE1Q9NZ43 259 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 HMGXB4Q9UGU5 601 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 NUFIP1Q9UHK0 495 aaKnown RBP3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 ANXA10Q9UJ72 324 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 HES2Q9Y543 173 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 NWD2Q9ULI1 1742 aa3.09□□□□□ -1.91
HMGB1P48-201ENST00000446155 KIF15Q9NS87 1388 aa3.09□□□□□ -1.92
HMGB1P48-201ENST00000446155 TECPR2O15040 1411 aa3.09□□□□□ -1.92
HMGB1P48-201ENST00000446155 CROCC2H7BZ55 1655 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 XRN1Q8IZH2 1706 aaKnown RBP3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 WDR90Q96KV7 1748 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 CACNA1AO00555 2505 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 C9J4A7 227 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 GABARAPO95166 117 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 DEXIO95424 95 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 INSP01308 110 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 IGKV1D-16P01601 117 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 IGLV2-23P01705 113 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 ZNF35P13682 527 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 OMGP23515 440 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 TALDO1P37837 337 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 RHOAP61586 193 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 LYZP61626 148 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 NDPQ00604 133 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 INCA1Q0VD86 236 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 RBMY1FQ15415 496 aaKnown RBP3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 TMEM183BQ1AE95 376 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 RGS21Q2M5E4 152 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 CEACAM21Q3KPI0 293 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 ORMDL2Q53FV1 153 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 TCEAL5Q5H9L2 206 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 TTC32Q5I0X7 151 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 RTL4Q6ZR62 310 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 NCCRP1Q6ZVX7 275 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 TMEM183AQ8IXX5 376 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 LGI3Q8N145 548 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 SUMF2Q8NBJ7 301 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 OR4K2Q8NGD2 314 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 OR13G1Q8NGZ3 307 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 OR10G6Q8NH81 332 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 OR1S1Q8NH92 325 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 TCEAL3Q969E4 200 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 RERGQ96A58 199 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 MAGEB18Q96M61 343 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 TOLLIPQ9H0E2 274 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 C12orf4Q9NQ89 552 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 MMP26Q9NRE1 261 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 PLEKHJ1Q9NW61 149 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 RBFOX1Q9NWB1 397 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms