RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 SLC22A4Q9H015 551 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 ZNF337Q9Y3M9 751 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 SAMHD1Q9Y3Z3 626 aaKnown RBP3.55□□□□□ -1.84
LSM5-205ENST00000409952 DNASE2O00115 360 aaPredicted RBP3.54□□□□□ -1.84
LSM5-205ENST00000409952 TAAR5O14804 337 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 NPIPB7O75200 414 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 SUPT3HO75486 399 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 REM1O75628 298 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 IGKV3-20P01619 116 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 P0C879 139 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 ATF1P18846 271 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 HTR1EP28566 365 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 SLCO1A2P46721 670 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 CAPZBP47756 277 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 LGALS7P47929 136 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 PPOXP50336 477 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 CXCR4P61073 352 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 ARF6P62330 175 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 RPL23P62829 140 aaKnown RBP3.54□□□□□ -1.84
LSM5-205ENST00000409952 HBG1P69891 147 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 HBG2P69892 147 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 PMVKQ15126 192 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 LRRC26Q2I0M4 334 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 KRTAP27-1Q3LI81 207 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 SPOPLQ6IQ16 392 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 LYPD2Q6UXB3 125 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 CAMK2N1Q7Z7J9 78 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 TRAPPC5Q8IUR0 188 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 ZNF440Q8IYI8 595 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 ZFP82Q8N141 532 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 ZCCHC24Q8N2G6 241 aaKnown RBP3.54□□□□□ -1.84
LSM5-205ENST00000409952 OR5B17Q8NGF7 314 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 RHOXF1Q8NHV9 184 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 TMEM159Q96B96 161 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 ZNF689Q96CS4 500 aaPredicted RBP3.54□□□□□ -1.84
LSM5-205ENST00000409952 SMIM12Q96EX1 92 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 PPP1R36Q96LQ0 422 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 MAGEB18Q96M61 343 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 PACRGQ96M98 296 aaPredicted RBP3.54□□□□□ -1.84
LSM5-205ENST00000409952 PRAP1Q96NZ9 151 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 SELENOSQ9BQE4 189 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 TMEM243Q9BU79 118 aa3.54□□□□□ -1.84
LSM5-205ENST00000409952 CC2D2AQ9P2K1 1620 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 A0A1B0GXF2 115 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 PLAC8L1A1L4L8 177 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 I3L4J1 428 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 STX10O60499 249 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 DCTN3O75935 186 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 GABARAPO95166 117 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 TCRBP04435 133 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 GIG44P09565 113 aaPredicted RBP3.53□□□□□ -1.84
LSM5-205ENST00000409952 RNF224P0DH78 156 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 TAC1P20366 129 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 OMGP23515 440 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 PSMA1P25786 263 aaKnown RBP3.53□□□□□ -1.84
LSM5-205ENST00000409952 SSTR5P35346 364 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 CD79BP40259 229 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 SLC18A1P54219 525 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 AESQ08117 197 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 TMED2Q15363 201 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 RSPO1Q2MKA7 263 aaPredicted RBP3.53□□□□□ -1.84
LSM5-205ENST00000409952 TMEM176BQ3YBM2 270 aaPredicted RBP3.53□□□□□ -1.84
LSM5-205ENST00000409952 TTMPQ5BVD1 217 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 CLEC12AQ5QGZ9 265 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 CST9Q5W186 159 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 C20orf203Q8NBC4 194 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 OR10G4Q8NGN3 311 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 CASTOR1Q8WTX7 329 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 TLCD1Q96CP7 247 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 KCNS1Q96KK3 526 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 TAAR1Q96RJ0 339 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 SAMD10Q9BYL1 202 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 UBXN6Q9BZV1 441 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 MS4A6AQ9H2W1 248 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 TPK1Q9H3S4 243 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 MAP1LC3AQ9H492 121 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 SLC2A9Q9NRM0 540 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 VNN3Q9NY84 501 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 DEC1Q9P2X7 70 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 PRO0628Q9UI54 55 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 NISCHQ9Y2I1 1504 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 LRRK1Q38SD2 2015 aa3.53□□□□□ -1.84
LSM5-205ENST00000409952 NPHP4O75161 1426 aaPredicted RBP3.53□□□□□ -1.85
LSM5-205ENST00000409952 ASTN1O14525 1302 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 EVC2Q86UK5 1308 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 IGKV1-27A0A075B6S5 117 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 MANBAO00462 879 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 UPK2O00526 184 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 CNMDO75829 334 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 IGLV2-23P01705 113 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 IFNA16P05015 189 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 CD99P14209 185 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 ZNF17P17021 662 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 CAPN2P17655 700 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 RPS12P25398 132 aaKnown RBP3.52□□□□□ -1.85
LSM5-205ENST00000409952 POLR2IP36954 125 aaKnown RBP3.52□□□□□ -1.85
LSM5-205ENST00000409952 IDH3GP51553 393 aaPredicted RBP3.52□□□□□ -1.85
LSM5-205ENST00000409952 CYP24A1Q07973 514 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 GSG1LQ6UXU4 331 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 ZNF497Q6ZNH5 498 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms