RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 DPYSL3Q14195 570 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 PDK2Q15119 407 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 EBPQ15125 230 aaKnown RBP2.34□□□□□ -2.03
RPA3-203ENST00000401447 KLHL38Q2WGJ6 581 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 TP53I3Q53FA7 332 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 PDZK1Q5T2W1 519 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 COMTD1Q86VU5 262 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 TPRA1Q86W33 373 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 C15orf54Q8N8G6 183 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 SPATA4Q8NEY3 305 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 OR2T33Q8NG76 320 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 OR10H4Q8NGA5 316 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 OR51G2Q8NGK0 314 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 OR1L4Q8NGR5 311 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 KCNG3Q8TAE7 436 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 RAPGEF5Q92565 580 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 EFHD2Q96C19 240 aaPredicted RBP2.34□□□□□ -2.03
RPA3-203ENST00000401447 ISOC1Q96CN7 298 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 C10orf35Q96D05 121 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 DOK1Q99704 481 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 ZNF670Q9BS34 389 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 PARD6BQ9BYG5 372 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 DYNLRB1Q9NP97 96 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 NLE1Q9NVX2 485 aaPredicted RBP2.34□□□□□ -2.03
RPA3-203ENST00000401447 BFARQ9NZS9 450 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 ONECUT1Q9UBC0 465 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 GLS2Q9UI32 602 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 PRPF19Q9UMS4 504 aaKnown RBP2.34□□□□□ -2.03
RPA3-203ENST00000401447 TIMM10BQ9Y5J6 103 aa2.34□□□□□ -2.03
RPA3-203ENST00000401447 PKHD1P08F94 4074 aa2.34□□□□□ -2.04
RPA3-203ENST00000401447 ARHGAP32A7KAX9 2087 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 IGHV2-70DA0A0C4DH43 119 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 ZNF816-ZNF321PA0A0X1KG74 233 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 SMCO3A2RU48 225 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 IQCF5A8MTL0 148 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 E7ESA3 106 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 E9PLD3 99 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 H3BMQ9 156 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 hCG_2039718K7EN88 272 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 FOXE1O00358 373 aaPredicted RBP2.33□□□□□ -2.04
RPA3-203ENST00000401447 NBR2O15453 112 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 RS1O15537 224 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 EFNA2O43921 213 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 MGRN1O60291 552 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 OR1I1O60431 355 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 ZNF254O75437 659 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 PSIP1O75475 530 aaKnown RBP2.33□□□□□ -2.04
RPA3-203ENST00000401447 DIRAS1O95057 198 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 IGHV2-5P01817 119 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 CD55P08174 381 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 SERPINA6P08185 405 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 NR2C1P13056 603 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 UCHL3P15374 230 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 SYT1P21579 422 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 COL8A2P25067 703 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 MSNP26038 577 aaKnown RBP2.33□□□□□ -2.04
RPA3-203ENST00000401447 ATP1B3P54709 279 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 RPL8P62917 257 aaKnown RBP2.33□□□□□ -2.04
RPA3-203ENST00000401447 BTN3A2P78410 334 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 HMGCS1Q01581 520 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 SLC25A11Q02978 314 aaKnown RBP2.33□□□□□ -2.04
RPA3-203ENST00000401447 LAGE3Q14657 143 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 RBMY1FQ15415 496 aaKnown RBP2.33□□□□□ -2.04
RPA3-203ENST00000401447 TRIM16LQ309B1 348 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 DEFB112Q30KQ8 113 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 RAET1LQ5VY80 246 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 ZNF57Q68EA5 555 aaPredicted RBP2.33□□□□□ -2.04
RPA3-203ENST00000401447 OR5M10Q6IEU7 315 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 TIFABQ6ZNK6 161 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 FRA10AC1Q70Z53 315 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 BZW1Q7L1Q6 419 aaKnown RBP2.33□□□□□ -2.04
RPA3-203ENST00000401447 HSD17B13Q7Z5P4 300 aaPredicted RBP2.33□□□□□ -2.04
RPA3-203ENST00000401447 GALNT10Q86SR1 603 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 ERI1Q8IV48 349 aaKnown RBP2.33□□□□□ -2.04
RPA3-203ENST00000401447 ZCCHC24Q8N2G6 241 aaKnown RBP2.33□□□□□ -2.04
RPA3-203ENST00000401447 RNF10Q8N5U6 811 aaKnown RBP2.33□□□□□ -2.04
RPA3-203ENST00000401447 PQLC3Q8N755 202 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 ZNF433Q8N7K0 673 aaPredicted RBP2.33□□□□□ -2.04
RPA3-203ENST00000401447 BBS1Q8NFJ9 593 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 OR52E2Q8NGJ4 325 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 OR10D3Q8NH80 312 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 AGR3Q8TD06 166 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 LKAAEAR1Q8TD35 194 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 TCTEX1D2Q8WW35 142 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 HGDQ93099 445 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 MCUR1Q96AQ8 359 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 TIMD4Q96H15 378 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 TMEM80Q96HE8 168 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 MS4A14Q96JA4 679 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 ALS2CR12Q96Q35 445 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 SLC38A2Q96QD8 506 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 VAT1Q99536 393 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 KCNS3Q9BQ31 491 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 PELOQ9BRX2 385 aaKnown RBP2.33□□□□□ -2.04
RPA3-203ENST00000401447 CENPKQ9BS16 269 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 CHID1Q9BWS9 393 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 ZNF442Q9H7R0 627 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 IKZF2Q9UKS7 526 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 TMCO1Q9UM00 188 aa2.33□□□□□ -2.04
RPA3-203ENST00000401447 COPS3Q9UNS2 423 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms