RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 CHST11Q9NPF2 352 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 KCNJ16Q9NPI9 418 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 PARP11Q9NR21 331 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 UBQLN4Q9NRR5 601 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 UFSP2Q9NUQ7 469 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 FAM206AQ9NX38 181 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 GAR1Q9NY12 217 aaKnown RBP4.75□□□□□ -1.65
ATG4A-204ENST00000372246 STARD10Q9Y365 291 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 KPTNQ9Y664 436 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 TMEM14AQ9Y6G1 99 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 UNC13CQ8NB66 2214 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 TMED7-TICAM2A0A0A6YYA0 188 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 CXorf51AA0A1B0GTR3 108 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF814B7Z6K7 855 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 MS4A18H0YCH9 400 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 H3BP45 60 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 CST7O76096 145 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 SEMA4FO95754 770 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 HOXC4P09017 264 aaPredicted RBP4.75□□□□□ -1.65
ATG4A-204ENST00000372246 DBHP09172 617 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 OR5AC1P0C628 307 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 TRGC1P0CF51 173 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 PGCP20142 388 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 COL8A2P25067 703 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 S100A2P29034 98 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 IL12BP29460 328 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 CSNK1EP49674 416 aaKnown RBP4.75□□□□□ -1.65
ATG4A-204ENST00000372246 DLK1P80370 383 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 ROM1Q03395 351 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 GLO1Q04760 184 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 NOGQ13253 232 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 KIR2DS3Q14952 304 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 ELOBQ15370 118 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 MS4A18Q3C1V0 323 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 TMEM176BQ3YBM2 270 aaPredicted RBP4.75□□□□□ -1.65
ATG4A-204ENST00000372246 TMEM164Q5U3C3 297 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 C1orf189Q5VU69 101 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 KCTD18Q6PI47 426 aaPredicted RBP4.75□□□□□ -1.65
ATG4A-204ENST00000372246 C20orf204Q6ZNR8 217 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 OR13H1Q8NG92 308 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 OR56B1Q8NGI3 324 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 HPSE2Q8WWQ2 592 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 MUCL1Q96DR8 90 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 SLAMF6Q96DU3 332 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 SAT2Q96F10 170 aaPredicted RBP4.75□□□□□ -1.65
ATG4A-204ENST00000372246 YPEL4Q96NS1 127 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 FAAP24Q9BTP7 215 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 TMEM59Q9BXS4 323 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 RAB18Q9NP72 206 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 GPR84Q9NQS5 396 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 SLC17A5Q9NRA2 495 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 SDK2Q58EX2 2172 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 PCDH15Q96QU1 1955 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 DSPP15924 2871 aaKnown RBP4.74□□□□□ -1.65
ATG4A-204ENST00000372246 A0A1B0GUS0 222 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 A6NNC1 897 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 A8MVM7 634 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 TMEM14DPA8MWL7 114 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 HSBP1L1C9JCN9 74 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 H3BMH7 237 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 PLPP3O14495 311 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 TNFSF14O43557 240 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 SPRY1O43609 319 aaPredicted RBP4.74□□□□□ -1.65
ATG4A-204ENST00000372246 DEDDO75618 318 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 SNAPC5O75971 98 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 PNMTP11086 282 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 PNLIPP16233 465 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 FAHP16930 419 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF10P21506 573 aaPredicted RBP4.74□□□□□ -1.65
ATG4A-204ENST00000372246 DDTP30046 118 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 CDX1P47902 265 aaPredicted RBP4.74□□□□□ -1.65
ATG4A-204ENST00000372246 BIDP55957 195 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 SLC35A1P78382 337 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 RUNX3Q13761 415 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 SOHLH1Q5JUK2 328 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 OR2T2Q6IF00 324 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 FDX2Q6P4F2 183 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 LANCL3Q6ZV70 420 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 FAM57BQ71RH2 274 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 SLC22A18ASQ8N1D0 253 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 SLC22A24Q8N4F4 322 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 C19orf47Q8N9M1 422 aaKnown RBP4.74□□□□□ -1.65
ATG4A-204ENST00000372246 SUMF2Q8NBJ7 301 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 OR8B12Q8NGG6 310 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 FGF14Q92915 247 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 TCTN2Q96GX1 697 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 OR5B2Q96R09 309 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 TAAR9Q96RI9 348 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 SLCO5A1Q9H2Y9 848 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 PRDM6Q9NQX0 595 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 OSGIN2Q9Y236 505 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 POLR1DQ9Y2S0 133 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 SMG1Q96Q15 3661 aaKnown RBP4.74□□□□□ -1.65
ATG4A-204ENST00000372246 CFAP47Q6ZTR5 3102 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF705GA8MUZ8 300 aaPredicted RBP4.74□□□□□ -1.65
ATG4A-204ENST00000372246 HMGB3O15347 200 aaKnown RBP4.74□□□□□ -1.65
ATG4A-204ENST00000372246 AHSA1O95433 338 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 TMEM225BP0DP42 221 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF20P17024 532 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 FSTP19883 344 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms