RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Seh1lQ8R2U0 360 aa11.89□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Srsf4Q8VE97 489 aaKnown RBP11.89□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Cnih4Q9CX13 139 aa11.89□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Rgs19Q9CX84 216 aa11.89□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Tssk4Q9D411 328 aa11.89□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Slc2a8Q9JIF3 477 aa11.89□□□□□ -0.51
Rnf4-204ENSMUST00000182047 SclyQ9JLI6 432 aa11.89□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Trav10nA0A075B622 114 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Trav10A0A075B642 114 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Gm5788A0A1Y7VK80 144 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Gm2022A0A1Y7VLT7 144 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Tmsb15aA2AEH9 79 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Vmn1r167G3UW71 315 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Gm19345G3UYD9 124 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 BC117090L7N257 96 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Lmx1bO88609 395 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 GipP48756 144 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Btg2Q04211 158 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Zfp157Q6PCM4 567 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Gpbar1Q80SS6 329 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Kctd9Q80UN1 339 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Negr1Q80Z24 348 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 C730034F03RikQ8BGL5 111 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Smim37Q8BT35 56 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 D1Ertd622eQ8VEB3 207 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Tm4sf5Q91XF2 196 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Rpl14Q9CR57 217 aaKnown RBP11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 NubplQ9CWD8 319 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Pga5Q9D106 387 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Ceacam13Q9DAT7 263 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 SigirrQ9JLZ8 409 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 RelnQ60841 3461 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 TprF6ZDS4 2431 aaKnown RBP11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Tmem185aA2AF53 350 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Esp34G3UXG0 151 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 GzmdP11033 252 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Id1P20067 168 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Ext1P97464 746 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 CybaQ61462 192 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Tas2r136Q7TQA8 305 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Olfr1087Q7TR63 313 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 GcaQ8VC88 220 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Sav1Q8VEB2 386 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Ccnl2Q9JJA7 518 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Sema7aQ9QUR8 664 aa11.88□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Olfr1066A2AK62 313 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Vmn2r80E9Q1L0 863 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Prr23a1G3UW32 258 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Timp1P12032 205 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Pax2P32114 414 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Mmp9P41245 730 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Tcl1aP56280 116 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 FapP97321 761 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 LipnQ3U4B4 400 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Gramd2aQ3V3G7 320 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Gpr6Q6YNI2 363 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Znf2Q8BIQ3 427 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Eif1axQ8BMJ3 144 aaKnown RBP11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 PhyhipQ8K0S0 330 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Tstd3Q9D0B5 157 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Olfr948Q9EQ95 321 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 D17h6s53eQ9Z1R4 293 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Gm42517A0A1Y7VLQ2 374 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Zfp944E9PUS4 492 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Rnase2bO35292 155 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Il1r1P13504 576 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Aldh3a2P47740 484 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Zdhhc8Q5Y5T5 762 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Vamp1Q62442 118 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Ppp1r14dQ7TT52 146 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Spata2lQ8BNN1 426 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 CenpxQ8C4X1 78 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 CcnqQ8QZR8 250 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Olfr1501Q8VFQ3 315 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Dtwd2Q9D0U1 298 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Tmem138Q9D6G5 162 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 PbkQ9JJ78 330 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Ighv1-78A0A0G2JGN3 117 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Igkv6-14A0A140T8P1 115 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Olfr65A0A1B0GSF4 315 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Gm6465F7A7Y6 181 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Gm3685J3QPP2 205 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Vmn2r58K7N6V2 862 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Sult2a4L7N245 285 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 GrnP28798 589 aaKnown RBP11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Stx4P70452 298 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Nrsn1P97799 196 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 AccslQ3UX83 580 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 SrmQ64674 302 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Olfr1126Q7TR49 314 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Olfr479Q7TRV1 327 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Prss27Q8BJR6 328 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Gucd1Q8BZI6 239 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Fn3krpQ8K274 309 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Slc25a28Q8R0Z5 364 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Rcc1Q8VE37 421 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Olfr24Q8VFM9 313 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Olfr131Q8VGC8 314 aa11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Nt5dc2Q91X76 390 aaKnown RBP11.87□□□□□ -0.51
Rnf4-204ENSMUST00000182047 Trav15d-2-dv6d-2A0A0G2JGQ7 117 aa11.86□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 44.6 ms