RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Ighv1-54A0A075B5W5 117 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Ccdc9bA3KGF9 545 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Olfr419E9Q0Y7 313 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Bet1O35623 118 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Serf1O88892 62 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Gm773Q3TML4 206 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 AccslQ3UX83 580 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Ubqln3Q8C5U9 658 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Olfr777Q8VFH3 311 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Eva1aQ91WM6 156 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Olfr702Q920Z2 318 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Pga5Q9D106 387 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Fam96bQ9D187 163 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 RetnlaQ9EP95 111 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Aqp9Q9JJJ3 295 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Nubp2Q9R061 275 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Olfr1438-ps1A0A140LHS9 319 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Fndc7A2AED3 737 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Kiaa1324A2AFS3 1009 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Ggta1l1A2AUQ7 319 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Mptx2D3YYJ7 219 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Olfr623E9Q382 317 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Gm3633L7N233 213 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Gm9611L7N476 213 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 CrygsO35486 178 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Tcstv3O70518 169 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Slc2a1P17809 492 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Nol4lQ6DIB4 494 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 HhipQ7TN16 700 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Fam53bQ8BGR5 422 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Zfp747Q8BHM7 422 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Q8BTC1 67 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 4930451G09RikQ8C5G4 195 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Rnf113a1Q8R3P8 341 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Olfr522Q8VGL1 312 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Cst14Q8VII3 130 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 MrgprgQ91ZB5 289 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Arl4dQ99PE9 201 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Emc6Q9CQW0 110 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Mtfp1Q9CRB8 166 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Ndufa9Q9DC69 377 aaKnown RBP11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Olfr887Q9EQA6 309 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Fgf16Q9ESL8 207 aa11.47□□□□□ -0.57
Nup88-203ENSMUST00000108531 Igkv6-32A0A140T8N9 115 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Mmp27D3YV89 551 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Gstp3F6RWR5 210 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 H2-T10F6T1I5 379 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Tex45G3XA23 500 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Ext1P97464 746 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Sec14l3Q5SQ27 401 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Rpl35Q6ZWV7 123 aaKnown RBP11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Wdr48Q8BH57 676 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Gemin8Q8BHE1 238 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Sh2d7Q8BI17 458 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 RhofQ8BYP3 211 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Vash1Q8C1W1 375 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Galnt6Q8C7U7 622 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Olfr1254Q8VFB1 314 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Olfr1008Q8VGC7 313 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Serpinb1bQ8VHP7 382 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 CytipQ91VY6 359 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Arrdc1Q99KN1 434 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 S100a16Q9D708 124 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Ap1s2Q9DB50 160 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 HikeshiQ9DD02 197 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Olfr716Q9EPG6 314 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Plekha3Q9ERS4 297 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Ap4m1Q9JKC7 449 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Klrc3Q9QXN7 221 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Gpr179E9PY61 2293 aa11.46□□□□□ -0.57
Nup88-203ENSMUST00000108531 Pcsk5Q04592 1877 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Tnrc18Q80WC3 2878 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr936J3KMV2 267 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Zfp955bL7N232 545 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Mmp9P41245 730 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Galr1P56479 348 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr733Q14AK5 308 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Gm10644Q3TZG3 87 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Ly6eQ64253 130 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 St6gal2Q76K27 524 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr107Q7TRK4 309 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Kiaa1456Q80WQ4 447 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Negr1Q80Z24 348 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Reep4Q8K072 257 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Elp5Q99L85 300 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Gdpd3Q99LY2 330 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Mid1ip1Q9CQ20 182 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Dram2Q9CR48 267 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Rpl14Q9CR57 217 aaKnown RBP11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Dmrtc1c1Q9D410 238 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Nudt22Q9DD16 308 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 TsnaxQ9QZE7 290 aaKnown RBP11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Serinc1Q9QZI8 453 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Fxyd1Q9Z239 92 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 Gm26992S4R1A3 76 aa11.46□□□□□ -0.58
Nup88-203ENSMUST00000108531 TrioQ0KL02 3102 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr1289A0A288CFY5 326 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 FggyA2AJL3 552 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Gm6890A2BG94 208 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Esp16A8R0U9 85 aa11.45□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 43.1 ms