RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 GmdsQ8K0C9 372 aa10.28□□□□□ -0.76
Ccdc28b-202ENSMUST00000106035 Gtf2f2Q8R0A0 249 aa10.28□□□□□ -0.76
Ccdc28b-202ENSMUST00000106035 Olfr866Q8VFI7 312 aa10.28□□□□□ -0.76
Ccdc28b-202ENSMUST00000106035 Vmn1r51Q8VIC6 319 aa10.28□□□□□ -0.76
Ccdc28b-202ENSMUST00000106035 Taldo1Q93092 337 aa10.28□□□□□ -0.76
Ccdc28b-202ENSMUST00000106035 Exosc5Q9CRA8 235 aa10.28□□□□□ -0.76
Ccdc28b-202ENSMUST00000106035 Gdpd1Q9CRY7 314 aa10.28□□□□□ -0.76
Ccdc28b-202ENSMUST00000106035 HeylQ9DBX7 326 aa10.28□□□□□ -0.76
Ccdc28b-202ENSMUST00000106035 Ntn4Q9JI33 628 aa10.28□□□□□ -0.76
Ccdc28b-202ENSMUST00000106035 Neu3Q9JMH7 418 aa10.28□□□□□ -0.76
Ccdc28b-202ENSMUST00000106035 Mmp16Q9WTR0 607 aa10.28□□□□□ -0.76
Ccdc28b-202ENSMUST00000106035 Upk1bQ9Z2C6 260 aa10.28□□□□□ -0.76
Ccdc28b-202ENSMUST00000106035 Zfp942B8JJA7 486 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Gm10608E9PZ13 166 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Olfr430E9Q5F1 317 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Olfr294F7CWV4 335 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Msl3l2G3X992 371 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Rab33bO35963 229 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Foxf2O54743 446 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Mab21l1O70299 359 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Cops4O88544 406 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 P04945 108 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 AlplP09242 524 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Cdkn1aP39689 159 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Sox7P40646 380 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 HhexP43120 271 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Tmem165P52875 323 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Loxl1P97873 607 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Kcnk9Q3LS21 402 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Gm732Q3V0P9 516 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Taar3Q5QD16 343 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Sox17Q61473 419 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Lrrn1Q61809 716 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Rps27Q6ZWU9 84 aaKnown RBP10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Olfr25Q7TRD6 313 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Serpina3fQ80X76 445 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Mbnl2Q8C181 373 aaKnown RBP10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Zbtb44Q8R0A2 453 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 DhrsxQ8VBZ0 335 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Olfr734Q8VFT4 313 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Sft2d3Q9CSV6 209 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Tmed5Q9CXE7 229 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Q9DAF8 208 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Tlr1Q9EPQ1 795 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Chst5Q9QUP4 395 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Defb3Q9WTL0 63 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Slc7a11Q9WTR6 502 aa10.27□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 TracA0A075B662 137 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Zfp109A0A0U1RPC5 652 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Gm266A6H634 200 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Zfp688E9Q5M9 274 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 JhyE9Q793 770 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Gm10020E9QAZ2 204 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Gm6665F6Y363 85 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Gm20834J3QM72 227 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 P04219 140 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Wnt2P21552 360 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Wnt5bP22726 359 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Tas2r123P59528 333 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Taf13P61216 124 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 EsrrgP62509 458 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 UqcrhP99028 89 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Rnf149Q3U2C5 394 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 GalnsQ571E4 520 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Olfr142Q60881 305 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Gstt2Q61133 244 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Krt72Q6IME9 520 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Tas2r110Q7M712 333 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Alkal2Q80UG6 151 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Zc3hc1Q80YV2 501 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Tssk5Q8C1R0 372 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Rad51ap1Q8C551 337 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Tmem56Q8CGF5 276 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Wdr77Q99J09 342 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Efcab11Q9D0E5 162 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Tmem138Q9D6G5 162 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Spata3Q9D9T6 193 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Lpar3Q9EQ31 354 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Olfr888Q9EQA5 314 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Dap3Q9ER88 391 aaKnown RBP10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Ifi30Q9ESY9 248 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 IckQ9JKV2 629 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Ing1Q9QXV3 279 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Prss30Q9QYZ9 310 aa10.26□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Stab1Q8R4Y4 2571 aa10.25□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Usf3B2RUQ2 2221 aa10.25□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Ighv14-3A0A075B5R9 117 aa10.25□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Olfr1098A2AVB0 315 aa10.25□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Galntl6E5D8G1 601 aa10.25□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Hmgxb3G3X9M3 1254 aa10.25□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Gm21913J3KML9 361 aa10.25□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Gm21776J3QPJ5 361 aa10.25□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Hipk1O88904 1210 aa10.25□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Cryba1P02525 198 aa10.25□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Zfp2P08043 459 aa10.25□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Ly6c1P0CW02 131 aa10.25□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Cdh2P15116 906 aa10.25□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Tpi1P17751 299 aaKnown RBP10.25□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Gadd45aP48316 165 aa10.25□□□□□ -0.77
Ccdc28b-202ENSMUST00000106035 Efnb1P52795 345 aa10.25□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 35.2 ms