RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 SEMA6DQ8NFY4 1073 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 FBXW5Q969U6 566 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 ABHD1Q96SE0 405 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 MYEF2Q9P2K5 600 aaKnown RBP12.36□□□□□ -0.43
LINC00339-208ENST00000634934 PURGQ9UJV8 347 aaKnown RBP12.36□□□□□ -0.43
LINC00339-208ENST00000634934 ING4Q9UNL4 249 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 DHDHQ9UQ10 334 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 PIGLQ9Y2B2 252 aa12.36□□□□□ -0.43
LINC00339-208ENST00000634934 LRBAP50851 2863 aa12.35□□□□□ -0.43
LINC00339-208ENST00000634934 LOC390937A0A1W2PQ73 354 aa12.35□□□□□ -0.43
LINC00339-208ENST00000634934 A8MV72 311 aaPredicted RBP12.35□□□□□ -0.43
LINC00339-208ENST00000634934 ECDO95905 644 aaPredicted RBP12.35□□□□□ -0.43
LINC00339-208ENST00000634934 ZNF20P17024 532 aa12.35□□□□□ -0.43
LINC00339-208ENST00000634934 ACKR3P25106 362 aa12.35□□□□□ -0.43
LINC00339-208ENST00000634934 KRTAP10-9P60411 292 aa12.35□□□□□ -0.43
LINC00339-208ENST00000634934 RPS11P62280 158 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC00339-208ENST00000634934 OR8B8Q15620 311 aa12.35□□□□□ -0.43
LINC00339-208ENST00000634934 TMEM255AQ5JRV8 349 aa12.35□□□□□ -0.43
LINC00339-208ENST00000634934 FBXL14Q8N1E6 418 aa12.35□□□□□ -0.43
LINC00339-208ENST00000634934 CCDC54Q8NEL0 328 aa12.35□□□□□ -0.43
LINC00339-208ENST00000634934 OR14K1Q8NGZ2 314 aa12.35□□□□□ -0.43
LINC00339-208ENST00000634934 OR56B4Q8NH76 319 aa12.35□□□□□ -0.43
LINC00339-208ENST00000634934 FGGYQ96C11 551 aa12.35□□□□□ -0.43
LINC00339-208ENST00000634934 MED30Q96HR3 178 aa12.35□□□□□ -0.43
LINC00339-208ENST00000634934 MED28Q9H204 178 aa12.35□□□□□ -0.43
LINC00339-208ENST00000634934 TAAR3PQ9P1P4 343 aa12.35□□□□□ -0.43
LINC00339-208ENST00000634934 V9GYS6 101 aa12.35□□□□□ -0.43
LINC00339-208ENST00000634934 CACNA1DQ01668 2161 aa12.35□□□□□ -0.43
LINC00339-208ENST00000634934 A0A0A6YYJ9 748 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 SMIM30A4D0T7 59 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 PAHP00439 452 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 IGHV3-13P01766 116 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 TCRBP04435 133 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 FAHP16930 419 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 KITLGP21583 273 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 MECP2P51608 486 aaKnown RBP12.34□□□□□ -0.43
LINC00339-208ENST00000634934 AP3S2P59780 193 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 KLF9Q13886 244 aaPredicted RBP12.34□□□□□ -0.43
LINC00339-208ENST00000634934 NKPD1Q17RQ9 610 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 Q499Y3 187 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 DNM1P46Q6ZS02 220 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 MUC15Q8N387 334 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 C9orf62Q8N4C0 152 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 TOMM5Q8N4H5 51 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 CSNK2A3Q8NEV1 391 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 RAB40AQ8WXH6 277 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 OR14A2Q96R54 314 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 PLSCR3Q9NRY6 295 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 ETV7Q9Y603 341 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 AUP1Q9Y679 476 aa12.34□□□□□ -0.43
LINC00339-208ENST00000634934 IGLV3-9A0A075B6K5 115 aa12.33□□□□□ -0.44
LINC00339-208ENST00000634934 TRBV5-5A0A0J9YX44 114 aa12.33□□□□□ -0.44
LINC00339-208ENST00000634934 A0A1W2PPK0 400 aa12.33□□□□□ -0.44
LINC00339-208ENST00000634934 ANKRD30BLA7E2S9 258 aa12.33□□□□□ -0.44
LINC00339-208ENST00000634934 IQCF6A8MYZ5 107 aa12.33□□□□□ -0.44
LINC00339-208ENST00000634934 AIPO00170 330 aa12.33□□□□□ -0.44
LINC00339-208ENST00000634934 LANCL1O43813 399 aa12.33□□□□□ -0.44
LINC00339-208ENST00000634934 LILRA1O75019 489 aa12.33□□□□□ -0.44
LINC00339-208ENST00000634934 CD2P06729 351 aa12.33□□□□□ -0.44
LINC00339-208ENST00000634934 CALCBP10092 127 aa12.33□□□□□ -0.44
LINC00339-208ENST00000634934 ANXA3P12429 323 aa12.33□□□□□ -0.44
LINC00339-208ENST00000634934 ATF1P18846 271 aa12.33□□□□□ -0.44
LINC00339-208ENST00000634934 GNALP38405 381 aa12.33□□□□□ -0.44
LINC00339-208ENST00000634934 FTMTQ8N4E7 242 aa12.33□□□□□ -0.44
LINC00339-208ENST00000634934 PAPOLGQ9BWT3 736 aaKnown RBP12.33□□□□□ -0.44
LINC00339-208ENST00000634934 RHBDD3Q9Y3P4 386 aa12.33□□□□□ -0.44
LINC00339-208ENST00000634934 MEIKINA0A087WXM9 373 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 ZNF816-ZNF321PA0A0X1KG74 233 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 PLSCR5A0PG75 271 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 B9A039 149 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 RAF1P04049 648 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 SULT1A3P0DMM9 295 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 SULT1A4P0DMN0 295 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 MAPK3P27361 379 aaPredicted RBP12.32□□□□□ -0.44
LINC00339-208ENST00000634934 ALDH3B1P43353 468 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 C6orf183Q5T699 404 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 Q6ZSR3 168 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 OR8G5Q8NG78 346 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 PIGCQ92535 297 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 TMEM106AQ96A25 262 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 ADAT3Q96EY9 351 aaPredicted RBP12.32□□□□□ -0.44
LINC00339-208ENST00000634934 C14orf79Q96F83 325 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 OR51J1Q9H342 316 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 MSL2Q9HCI7 577 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 GPR160Q9UJ42 338 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 ELF5Q9UKW6 265 aaPredicted RBP12.32□□□□□ -0.44
LINC00339-208ENST00000634934 POLQO75417 2590 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 DHRS7CA6NNS2 312 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 GABARAPH6UMI1 98 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 CA6P23280 308 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 SSTR2P30874 369 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 OR10A3P58181 314 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 EFNB3Q15768 340 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 ZBTB37Q5TC79 503 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 OLFML2AQ68BL7 652 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 ZNF611Q8N823 705 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 GTF3AQ92664 365 aaKnown RBP12.32□□□□□ -0.44
LINC00339-208ENST00000634934 ORAI1Q96D31 301 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 DERL3Q96Q80 235 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 CACNG6Q9BXT2 260 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms