RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 TEX101Q9BY14 249 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 NAT8Q9UHE5 227 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 KLHDC2Q9Y2U9 406 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 RFNGQ9Y644 331 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 DBX1A6NMT0 343 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 THBS4P35443 961 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 NUBP1P53384 320 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 SLC46A2Q9BY10 475 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 TRAPPC2LQ9UL33 140 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 LTN1O94822 1766 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 A0A1B0GUS0 222 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 LRRC3CA6NJW4 275 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 NXPH2O95156 264 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 PRPH2P23942 346 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 GNG4P50150 75 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 RPS23P62266 143 aaKnown RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 ZNF816Q0VGE8 651 aaPredicted RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 TMEM234Q8WY98 164 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 GMPPAQ96IJ6 420 aaPredicted RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 ZNF514Q96K75 400 aaPredicted RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 RSG1Q9BU20 258 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 HEYLQ9NQ87 328 aaPredicted RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 CACNA1CQ13936 2221 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 DEFB108AA8MXU0 73 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 RHBDL1O75783 438 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 HLA-BQ31612 363 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 RAET1LQ5VY80 246 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 ANKRD16Q6P6B7 361 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 C12orf76Q8N812 135 aaPredicted RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 ZPLD1Q8TCW7 415 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 HOXA5P20719 270 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 RPS15P62841 145 aaKnown RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 PMCHL1Q16048 86 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 MFSD12Q6NUT3 480 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 PMCHL2Q9BQD1 86 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 TIMM29Q9BSF4 260 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 HDHD3Q9BSH5 251 aaPredicted RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 LMF2Q9BU23 707 aaKnown RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 SPTBN1Q01082 2364 aaKnown RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 IGHV3-9P01782 118 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 NMUP48645 174 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 GPR84Q9NQS5 396 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 ZFC3H1O60293 1989 aaKnown RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 CHRM2P08172 466 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 CLDN17P56750 224 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 FMODQ06828 376 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 WFDC5Q8TCV5 224 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 SLC26A1Q9H2B4 701 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 LSM4Q9Y4Z0 139 aaKnown RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 FER1L6Q2WGJ9 1857 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 C11orf94C9JXX5 98 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 GCGP01275 180 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 MPLP40238 635 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 SPRED2Q7Z698 418 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 PSMF1Q92530 271 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 NMES1Q9C002 83 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 PIAS2O75928 621 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 IGHV3-13P01766 116 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 IGHV3-7P01780 117 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 ZNF121P58317 390 aaPredicted RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 WDR38Q5JTN6 314 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 NHLRC2Q8NBF2 726 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 OR5A2Q8NGI9 324 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 OR10J5Q8NHC4 309 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 SLAMF6Q96DU3 332 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 SIGLEC11Q96RL6 698 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 FOXQ1Q9C009 403 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 PARLQ9H300 379 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 ABI3Q9P2A4 366 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 NWD2Q9ULI1 1742 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 IGHV3-20A0A0C4DH32 117 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 KLK8O60259 260 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 SELEP16581 610 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 C21orf58P58505 322 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 ELOBQ15370 118 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 SNAI3Q3KNW1 292 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 OR2I1PQ8NGU4 316 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 BAHD1Q8TBE0 780 aaPredicted RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 SPTSSAQ969W0 71 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 RAB18Q9NP72 206 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 NEU3Q9UQ49 428 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 OR2M5A3KFT3 312 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 TMEM128Q5BJH2 165 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 LBX2Q6XYB7 198 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 FA2HQ7L5A8 372 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 OR10S1Q8NGN2 331 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 R4GN57 208 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 ARRDC5A6NEK1 342 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 DEGS1O15121 323 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 TGFAP01135 160 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 APODP05090 189 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 EPHA8P29322 1005 aaPredicted RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 D2HGDHQ8N465 521 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 RBMXL3Q8N7X1 1067 aaKnown RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 SLC52A3Q9NQ40 469 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 LOC390937A0A1W2PQ73 354 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 J3QR89 54 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 PRAMEF4O60810 478 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 VAMP5O95183 116 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms