RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 RGP1Q92546 391 aaPredicted RBP13.6□□□□□ -0.23
RARA-209ENST00000579727 SGCDQ92629 289 aa13.6□□□□□ -0.23
RARA-209ENST00000579727 COMMD4Q9H0A8 199 aa13.6□□□□□ -0.23
RARA-209ENST00000579727 TRIM36Q9NQ86 728 aa13.6□□□□□ -0.23
RARA-209ENST00000579727 PLCXD1Q9NUJ7 323 aa13.6□□□□□ -0.23
RARA-209ENST00000579727 CHCHD3Q9NX63 227 aaKnown RBP13.6□□□□□ -0.23
RARA-209ENST00000579727 CNOT2Q9NZN8 540 aaKnown RBP13.6□□□□□ -0.23
RARA-209ENST00000579727 SLC7A11Q9UPY5 501 aa13.6□□□□□ -0.23
RARA-209ENST00000579727 IGKV1-9A0A0C4DH69 117 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 TMEM212A6NML5 194 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 J3QT63 122 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 CCDC159P0C7I6 412 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 FAM157CP0CG43 387 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 MUC1P15941 1255 aaPredicted RBP13.59□□□□□ -0.23
RARA-209ENST00000579727 C21orf33P30042 268 aaPredicted RBP13.59□□□□□ -0.23
RARA-209ENST00000579727 CFHR2P36980 270 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 SOX2P48431 317 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 TGM4P49221 684 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 MRPL28Q13084 256 aaKnown RBP13.59□□□□□ -0.23
RARA-209ENST00000579727 IKZF1Q13422 519 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 MED21Q13503 144 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 RIPK1Q13546 671 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 DOC2BQ14184 412 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 CDK5R1Q15078 307 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 C6orf141Q5SZD1 244 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 STUMQ69YW2 141 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 ZNF573Q86YE8 665 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 PP6455Q8WZ26 134 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 ST8SIA4Q92187 359 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 BORCS8Q96FH0 119 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 C7orf69Q9H7B7 122 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 BABAM2Q9NXR7 383 aa13.59□□□□□ -0.23
RARA-209ENST00000579727 ANK2Q01484 3957 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 PNMA8CA0A1B0GUJ8 204 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 C22orf46C9J442 243 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 PTGES3LE9PB15 166 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 DVL1O14640 695 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 SERPINA3P01011 423 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 AMY2BP19961 511 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 MYF6P23409 242 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 AZGP1P25311 298 aaKnown RBP13.58□□□□□ -0.24
RARA-209ENST00000579727 CNN3Q15417 329 aaKnown RBP13.58□□□□□ -0.24
RARA-209ENST00000579727 RNF144BQ7Z419 303 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 POC1AQ8NBT0 407 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 OR13C5Q8NGS8 318 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 OR52N1Q8NH53 320 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 ZNF671Q8TAW3 534 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 SLAMF9Q96A28 289 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 RFT1Q96AA3 541 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 TMIGD2Q96BF3 282 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 C10orf35Q96D05 121 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 CNBD2Q96M20 576 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 SPACA5Q96QH8 159 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 ANKRD60Q9BZ19 345 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 FKBP14Q9NWM8 211 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 PAK1IP1Q9NWT1 392 aaPredicted RBP13.58□□□□□ -0.24
RARA-209ENST00000579727 NLKQ9UBE8 527 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 OPN4Q9UHM6 478 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 DHDHQ9UQ10 334 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 RRP15Q9Y3B9 282 aaKnown RBP13.58□□□□□ -0.24
RARA-209ENST00000579727 PCDHGB5Q9Y5G0 923 aa13.58□□□□□ -0.24
RARA-209ENST00000579727 DOCK11Q5JSL3 2073 aa13.57□□□□□ -0.24
RARA-209ENST00000579727 IGHV2-70DA0A0C4DH43 119 aa13.57□□□□□ -0.24
RARA-209ENST00000579727 OR2AT4A6NND4 320 aa13.57□□□□□ -0.24
RARA-209ENST00000579727 RNF212BA8MTL3 300 aa13.57□□□□□ -0.24
RARA-209ENST00000579727 MYL12BO14950 172 aa13.57□□□□□ -0.24
RARA-209ENST00000579727 NDUFA2O43678 99 aa13.57□□□□□ -0.24
RARA-209ENST00000579727 OCM2P0CE71 109 aa13.57□□□□□ -0.24
RARA-209ENST00000579727 OCMP0CE72 109 aaPredicted RBP13.57□□□□□ -0.24
RARA-209ENST00000579727 ATF1P18846 271 aa13.57□□□□□ -0.24
RARA-209ENST00000579727 GABRA2P47869 451 aa13.57□□□□□ -0.24
RARA-209ENST00000579727 POU3F4P49335 361 aa13.57□□□□□ -0.24
RARA-209ENST00000579727 CEBPDP49716 269 aaPredicted RBP13.57□□□□□ -0.24
RARA-209ENST00000579727 FUT6P51993 359 aa13.57□□□□□ -0.24
RARA-209ENST00000579727 PAX2Q02962 417 aa13.57□□□□□ -0.24
RARA-209ENST00000579727 RPL22L1Q6P5R6 122 aaKnown RBP13.57□□□□□ -0.24
RARA-209ENST00000579727 ZNF485Q8NCK3 441 aa13.57□□□□□ -0.24
RARA-209ENST00000579727 GAFA1Q96PS6 74 aa13.57□□□□□ -0.24
RARA-209ENST00000579727 POLDIP2Q9Y2S7 368 aa13.57□□□□□ -0.24
RARA-209ENST00000579727 POLR3KQ9Y2Y1 108 aaPredicted RBP13.57□□□□□ -0.24
RARA-209ENST00000579727 INSIG2Q9Y5U4 225 aa13.57□□□□□ -0.24
RARA-209ENST00000579727 WNK2Q9Y3S1 2297 aa13.56□□□□□ -0.24
RARA-209ENST00000579727 IGKV1D-17A0A075B6S4 117 aa13.56□□□□□ -0.24
RARA-209ENST00000579727 NKX6-3A6NJ46 265 aa13.56□□□□□ -0.24
RARA-209ENST00000579727 J3QLI3 93 aa13.56□□□□□ -0.24
RARA-209ENST00000579727 PGA5P0DJD9 388 aa13.56□□□□□ -0.24
RARA-209ENST00000579727 GATA3P23771 443 aa13.56□□□□□ -0.24
RARA-209ENST00000579727 VHLP40337 213 aa13.56□□□□□ -0.24
RARA-209ENST00000579727 SRSF2Q01130 221 aaKnown RBP13.56□□□□□ -0.24
RARA-209ENST00000579727 CCDC58Q4VC31 144 aa13.56□□□□□ -0.24
RARA-209ENST00000579727 ACP7Q6ZNF0 438 aa13.56□□□□□ -0.24
RARA-209ENST00000579727 SLC25A26Q70HW3 274 aa13.56□□□□□ -0.24
RARA-209ENST00000579727 UTS2BQ765I0 119 aa13.56□□□□□ -0.24
RARA-209ENST00000579727 EGFL6Q8IUX8 553 aa13.56□□□□□ -0.24
RARA-209ENST00000579727 ANGPTL6Q8NI99 470 aa13.56□□□□□ -0.24
RARA-209ENST00000579727 RPS4Y2Q8TD47 263 aa13.56□□□□□ -0.24
RARA-209ENST00000579727 HAVCR2Q8TDQ0 301 aa13.56□□□□□ -0.24
RARA-209ENST00000579727 C12orf43Q96C57 262 aaKnown RBP13.56□□□□□ -0.24
RARA-209ENST00000579727 ORAI1Q96D31 301 aa13.56□□□□□ -0.24
RARA-209ENST00000579727 SMIM19Q96E16 107 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms