RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 PPP5CP53041 499 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 UGT2B15P54855 530 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 RPL27P61353 136 aaKnown RBP3.18□□□□□ -1.9
NUP88-202ENST00000570937 PCBD1P61457 104 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 RPS4XP62701 263 aaKnown RBP3.18□□□□□ -1.9
NUP88-202ENST00000570937 SPIBQ01892 262 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 CD47Q08722 323 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 COX10Q12887 443 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 CAMK2DQ13557 499 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 GK3PQ14409 553 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 MOGQ16653 247 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 GSG1Q2KHT4 349 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 CEACAM16Q2WEN9 425 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 ZBED5Q49AG3 693 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 HIKESHIQ53FT3 197 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 TMEM53Q6P2H8 277 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 PODNL1Q6PEZ8 512 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 SMARCD3Q6STE5 483 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 ARL9Q6T311 187 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 DPY19L2P2Q6ZN68 376 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 C10orf67Q8IYJ2 551 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 C1orf174Q8IYL3 243 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 TMEM123Q8N131 208 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 SLC22A24Q8N4F4 322 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 LRTM2Q8N967 370 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 WDR31Q8NA23 367 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 OR4K5Q8NGD3 323 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 OR10G7Q8NGN6 311 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 OR52J3Q8NH60 311 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 PFN4Q8NHR9 129 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 SLC7A13Q8TCU3 470 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 C17orf50Q8WW18 174 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 NRGNQ92686 78 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 TMEM54Q969K7 222 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 C7orf34Q96L11 122 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 SLC38A2Q96QD8 506 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 TNFRSF13CQ96RJ3 184 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 THTPAQ9BU02 230 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 ALG12Q9BV10 488 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 EMC6Q9BV81 110 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 C1QTNF6Q9BXI9 259 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 MRPL13Q9BYD1 178 aaKnown RBP3.18□□□□□ -1.9
NUP88-202ENST00000570937 CXXC4Q9H2H0 198 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 MMADHCQ9H3L0 296 aaPredicted RBP3.18□□□□□ -1.9
NUP88-202ENST00000570937 TXNIPQ9H3M7 391 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 LIME1Q9H400 295 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 REEP1Q9H902 201 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 RNF121Q9H920 327 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 SIAEQ9HAT2 523 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 CCNB1IP1Q9NPC3 277 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 NKIRAS2Q9NYR9 191 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 TAS2R1Q9NYW7 299 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 PLEKHA6Q9Y2H5 1048 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 V9GYQ6 96 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 TEX15Q9BXT5 2789 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 PKDREJQ9NTG1 2253 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 NOTCH2Q04721 2471 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 CACNA1DQ01668 2161 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 ANKHD1Q8IWZ3 2542 aaKnown RBP3.17□□□□□ -1.9
NUP88-202ENST00000570937 TRAV27A0A087WT01 109 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 PRSS37A4D1T9 235 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 C12orf71A8MTZ7 269 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 SHISA9B4DS77 424 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 TNFRSF11BO00300 401 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 IMPA2O14732 288 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 TLX2O43763 284 aaPredicted RBP3.17□□□□□ -1.9
NUP88-202ENST00000570937 PDE5AO76074 875 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 CCNB2O95067 398 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 RENP00797 406 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 IGKV3-15P01624 115 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 IGHMP01871 453 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 SEMG1P04279 462 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 SERPINA5P05154 406 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 CD14P08571 375 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 TSPAN19P0C672 248 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 CD99P14209 185 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 B4GALT1P15291 398 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 PTNP21246 168 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 LOXP28300 417 aaPredicted RBP3.17□□□□□ -1.9
NUP88-202ENST00000570937 CRABP1P29762 137 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 GPR4P46093 362 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 IDH3GP51553 393 aaPredicted RBP3.17□□□□□ -1.9
NUP88-202ENST00000570937 ATP5J2P56134 94 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 RPS23P62266 143 aaKnown RBP3.17□□□□□ -1.9
NUP88-202ENST00000570937 SNRPD2P62316 118 aaKnown RBP3.17□□□□□ -1.9
NUP88-202ENST00000570937 VLDLRP98155 873 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 DHODHQ02127 395 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 NPRL3Q12980 569 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 BNIP1Q12981 228 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 FLOT2Q14254 428 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 RAB35Q15286 201 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 HIST3H3Q16695 136 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 TBC1D28Q2M2D7 210 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 RFX4Q33E94 735 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 C10orf128Q5T292 105 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 FAM27BQ5VT28 67 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 LCN8Q6JVE9 175 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 DNM1P34Q6PK57 102 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 TBPL2Q6SJ96 375 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 NHLRC1Q6VVB1 395 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms