RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ARPC5LQ9BPX5 153 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 RTL8AQ9BWD3 113 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 EGLN1Q9GZT9 426 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 VCX3AQ9NNX9 186 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 MYOZ1Q9NP98 299 aaPredicted RBP5.35□□□□□ -1.55
PRKDC-211ENST00000546304 DECR2Q9NUI1 292 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 IL19Q9UHD0 177 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 DHDHQ9UQ10 334 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 MPC1Q9Y5U8 109 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 ABCA1O95477 2261 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 DOCK11Q5JSL3 2073 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 SONP18583 2426 aaKnown RBP5.34□□□□□ -1.55
PRKDC-211ENST00000546304 A0A087WXM4 84 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 IGHV1-69-2A0A0G2JMI3 117 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 IGHV3-64DA0A0J9YX35 117 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 TRBV5-5A0A0J9YX44 114 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 A6NIN4 97 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 OR5B21A6NL26 309 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 A6NLC8 198 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 CYSRT1A8MQ03 144 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 SSX4O60224 188 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 RP2O75695 350 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 PTBP3O95758 552 aaKnown RBP5.34□□□□□ -1.55
PRKDC-211ENST00000546304 NRASP01111 189 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 CD1AP06126 327 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 OCM2P0CE71 109 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 SMIM18P0DKX4 95 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 DAOP14920 347 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 TNFRSF1AP19438 455 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 PSMA1P25786 263 aaKnown RBP5.34□□□□□ -1.55
PRKDC-211ENST00000546304 MAPK3P27361 379 aaPredicted RBP5.34□□□□□ -1.55
PRKDC-211ENST00000546304 SOX2P48431 317 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 GPM6AP51674 278 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 RPS11P62280 158 aaKnown RBP eCLIP5.34□□□□□ -1.55
PRKDC-211ENST00000546304 RPS25P62851 125 aaKnown RBP5.34□□□□□ -1.55
PRKDC-211ENST00000546304 MRPS11P82912 194 aaKnown RBP5.34□□□□□ -1.55
PRKDC-211ENST00000546304 MZT1Q08AG7 82 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 ZNF154Q13106 437 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 CNN3Q15417 329 aaKnown RBP5.34□□□□□ -1.55
PRKDC-211ENST00000546304 NEDD8Q15843 81 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 SPRNQ5BIV9 151 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 PRAMEF6Q5VXH4 476 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 CLEC2AQ6UVW9 174 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 KCTD8Q6ZWB6 473 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 KRT74Q7RTS7 529 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 WDR86Q86TI4 376 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 PHC2Q8IXK0 858 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 PARP16Q8N5Y8 322 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 SPERTQ8NA61 448 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 OR13C9Q8NGT0 318 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 NPRL2Q8WTW4 380 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 OR5P3Q8WZ94 311 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 PIGCQ92535 297 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 THRSPQ92748 146 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 TMEM106AQ96A25 262 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 SPSB1Q96BD6 273 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 TECTBQ96PL2 329 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 OR14A2Q96R54 314 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 NR1H4Q96RI1 486 aaPredicted RBP5.34□□□□□ -1.55
PRKDC-211ENST00000546304 MICU1Q9BPX6 476 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 TMED9Q9BVK6 235 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 FGF23Q9GZV9 251 aaPredicted RBP5.34□□□□□ -1.55
PRKDC-211ENST00000546304 CXXC4Q9H2H0 198 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 PPP1R3EQ9H7J1 279 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 CHODLQ9H9P2 273 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 ISYNA1Q9NPH2 558 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 GPR173Q9NS66 373 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 ZNF275Q9NSD4 429 aaPredicted RBP5.34□□□□□ -1.55
PRKDC-211ENST00000546304 C14orf119Q9NWQ9 140 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 NDUFB11Q9NX14 153 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 CACNG2Q9Y698 323 aa5.34□□□□□ -1.55
PRKDC-211ENST00000546304 ANK3Q12955 4377 aaKnown RBP5.34□□□□□ -1.56
PRKDC-211ENST00000546304 hCG_1807616A0A1W2PRN6 198 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 PQLC2LA1A4F0 135 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 LRP5LA4QPB2 252 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 TRIM64CA6NLI5 447 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 TMEM210A6NLX4 147 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 ZNF879B4DU55 563 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 CLDN25C9JDP6 229 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 LYNX1G3V0Z9 82 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 CCRL2O00421 344 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 SULT1B1O43704 296 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 CDC14BO60729 498 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 INMTO95050 263 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 SERPINA3P01011 423 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 OCMP0CE72 109 aaPredicted RBP5.33□□□□□ -1.56
PRKDC-211ENST00000546304 LYNX1P0DP58 116 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 AZGP1P25311 298 aaKnown RBP5.33□□□□□ -1.56
PRKDC-211ENST00000546304 GABRA5P31644 462 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 PDLIM4P50479 330 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 PPP3R1P63098 170 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 GNG3P63215 75 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 HNRNPA0Q13151 305 aaKnown RBP5.33□□□□□ -1.56
PRKDC-211ENST00000546304 MAB21L1Q13394 359 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 GPR50Q13585 617 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 TPBGQ13641 420 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 MPPED2Q15777 294 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 SSX1Q16384 188 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 CARTPTQ16568 116 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 CLEC12BQ2HXU8 276 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms