RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 DUX4L2P0CJ85 424 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 DUX4L3P0CJ86 424 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 DUX4L4P0CJ87 422 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 DUX4L5P0CJ88 424 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 DUX4L6P0CJ89 424 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 DUX4L7P0CJ90 424 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 TGM4P49221 684 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 NPY4RP50391 375 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 FUT6P51993 359 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 PAX2Q02962 417 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 IKZF1Q13422 519 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 MED21Q13503 144 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 CNN3Q15417 329 aaKnown RBP7.67□□□□□ -1.18
SNHG1-215ENST00000540904 STUMQ69YW2 141 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 XAF1Q6GPH4 301 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 DUX4L9Q6RFH8 374 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-215ENST00000540904 AHSA2Q719I0 299 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 SLC36A1Q7Z2H8 476 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 C1QL2Q7Z5L3 287 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 CALHM1Q8IU99 346 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 BATF2Q8N1L9 274 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 STX19Q8N4C7 294 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 TEX29Q8N6K0 151 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 FAM216BQ8N7L0 139 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 POC1AQ8NBT0 407 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 OR5AK2Q8NH90 309 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 NANPQ8TBE9 248 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 HAVCR2Q8TDQ0 301 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 FBLIM1Q8WUP2 373 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 RAB40AQ8WXH6 277 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 ST8SIA4Q92187 359 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 TMIGD2Q96BF3 282 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 BORCS8Q96FH0 119 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 NUDT16L1Q9BRJ7 211 aaKnown RBP7.67□□□□□ -1.18
SNHG1-215ENST00000540904 COMMD4Q9H0A8 199 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 NLKQ9UBE8 527 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 KAAG1Q9UBP8 84 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 DUX4Q9UBX2 424 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 PSORS1C1Q9UIG5 152 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 POLDIP2Q9Y2S7 368 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 IGKV1-27A0A075B6S5 117 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 IGKV1-9A0A0C4DH69 117 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 KIR2DS1A0A191URI9 304 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 NKX6-3A6NJ46 265 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 OR2AT4A6NND4 320 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 NDUFB3O43676 98 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 ENSAO43768 121 aaKnown RBP7.66□□□□□ -1.18
SNHG1-215ENST00000540904 FCN3O75636 299 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 INMTO95050 263 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 NXPH2O95156 264 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 ATP6V1G2O95670 118 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 PGA5P0DJD9 388 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 PIPP12273 146 aaPredicted RBP7.66□□□□□ -1.18
SNHG1-215ENST00000540904 SELLP14151 372 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 ATF1P18846 271 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 AMY2BP19961 511 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 GABRA2P47869 451 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 PAX8Q06710 450 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 SMIM21Q3B7S5 101 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 CCDC58Q4VC31 144 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 ARMCX4Q5H9R4 360 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 CD276Q5ZPR3 534 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 RPL22L1Q6P5R6 122 aaKnown RBP7.66□□□□□ -1.18
SNHG1-215ENST00000540904 ACP7Q6ZNF0 438 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 UTS2BQ765I0 119 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 BTN2A1Q7KYR7 527 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 FGFRL1Q8N441 504 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 OR13C9Q8NGT0 318 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 ANGPTL6Q8NI99 470 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 TSEN15Q8WW01 171 aaKnown RBP7.66□□□□□ -1.18
SNHG1-215ENST00000540904 GATAD2BQ8WXI9 593 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 DACT3Q96B18 629 aaPredicted RBP7.66□□□□□ -1.18
SNHG1-215ENST00000540904 NRIP2Q9BQI9 281 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 PLCXD1Q9NUJ7 323 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 BABAM2Q9NXR7 383 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 RASL12Q9NYN1 266 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 CNOT2Q9NZN8 540 aaKnown RBP7.66□□□□□ -1.18
SNHG1-215ENST00000540904 DHDHQ9UQ10 334 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 JMJD1CQ15652 2540 aa7.66□□□□□ -1.18
SNHG1-215ENST00000540904 IGKV1D-17A0A075B6S4 117 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 RFPL4AA6NLU0 287 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 PTGES3LE9PB15 166 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 RFPL4AL1F8VTS6 287 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 RGS9O75916 674 aaPredicted RBP7.65□□□□□ -1.18
SNHG1-215ENST00000540904 RPSAP08865 295 aaKnown RBP7.65□□□□□ -1.18
SNHG1-215ENST00000540904 PSG2P11465 335 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 EPHA1P21709 976 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 PRKACBP22694 351 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 MPZP25189 248 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 AZGP1P25311 298 aaKnown RBP7.65□□□□□ -1.18
SNHG1-215ENST00000540904 C21orf33P30042 268 aaPredicted RBP7.65□□□□□ -1.18
SNHG1-215ENST00000540904 SOX2P48431 317 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 POU3F4P49335 361 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 RBP2P50120 134 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 ATP1B3P54709 279 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 MTCP1P56278 107 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 IL13RA1P78552 427 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 SRSF2Q01130 221 aaKnown RBP7.65□□□□□ -1.18
SNHG1-215ENST00000540904 IL24Q13007 206 aa7.65□□□□□ -1.18
SNHG1-215ENST00000540904 SCGB2A2Q13296 93 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms