RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 TMEM155Q4W5P6 130 aa15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 HSD17B12Q53GQ0 312 aa15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 C1QL2Q7Z5L3 287 aa15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 NAA40Q86UY6 237 aa15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 PLPP7Q8NBV4 271 aa15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 OR13C3Q8NGS6 347 aa15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 TMEM106AQ96A25 262 aa15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 RNF167Q9H6Y7 350 aa15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 PATZ1Q9HBE1 687 aaKnown RBP15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 N6AMT1Q9Y5N5 214 aa15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 TANC2Q9HCD6 1990 aa15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 TRAV1-2A0A0B4J238 106 aa15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 IFNL4K9M1U5 179 aa15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 MTRF1O75570 445 aaKnown RBP15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 DHRS3O75911 302 aa15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 CALRP27797 417 aaKnown RBP15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 TGFBR1P36897 503 aa15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 SOX2P48431 317 aa15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 ZMYND11Q15326 602 aa15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 GLYATL3Q5SZD4 288 aa15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 FAM27D1Q5T7N8 215 aa15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 LRRC28Q86X40 367 aaPredicted RBP15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 MUC20Q8N307 709 aaPredicted RBP15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 SPSB4Q96A44 273 aa15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 C10orf35Q96D05 121 aa15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 REEP6Q96HR9 211 aa15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 MEGF10Q96KG7 1140 aa15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 JMJD8Q96S16 334 aa15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 GCM1Q9NP62 436 aa15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 NOX4Q9NPH5 578 aa15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 TMEM100Q9NV29 134 aa15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 CCDC59Q9P031 241 aaKnown RBP15.12■□□□□ 0.01
SQSTM1-204ENST00000453046 ANK2Q01484 3957 aa15.11■□□□□ 0.01
SQSTM1-204ENST00000453046 C5orf63A6NC05 138 aa15.11■□□□□ 0.01
SQSTM1-204ENST00000453046 IQCF6A8MYZ5 107 aa15.11■□□□□ 0.01
SQSTM1-204ENST00000453046 H0YL77 283 aa15.11■□□□□ 0.01
SQSTM1-204ENST00000453046 TMEM178BH3BS89 294 aa15.11■□□□□ 0.01
SQSTM1-204ENST00000453046 ZFP36P26651 326 aaKnown RBP15.11■□□□□ 0.01
SQSTM1-204ENST00000453046 MDH2P40926 338 aaKnown RBP15.11■□□□□ 0.01
SQSTM1-204ENST00000453046 GFOD2Q3B7J2 385 aa15.11■□□□□ 0.01
SQSTM1-204ENST00000453046 BPIFB2Q8N4F0 458 aa15.11■□□□□ 0.01
SQSTM1-204ENST00000453046 SEMA6DQ8NFY4 1073 aa15.11■□□□□ 0.01
SQSTM1-204ENST00000453046 DYNC2LI1Q8TCX1 351 aa15.11■□□□□ 0.01
SQSTM1-204ENST00000453046 ZFAND2BQ8WV99 257 aa15.11■□□□□ 0.01
SQSTM1-204ENST00000453046 FAM71F1Q96KD3 344 aaPredicted RBP15.11■□□□□ 0.01
SQSTM1-204ENST00000453046 SLC30A2Q9BRI3 323 aa15.11■□□□□ 0.01
SQSTM1-204ENST00000453046 DCUN1D5Q9BTE7 237 aa15.11■□□□□ 0.01
SQSTM1-204ENST00000453046 SUCNR1Q9BXA5 334 aa15.11■□□□□ 0.01
SQSTM1-204ENST00000453046 PLEKHA1Q9HB21 404 aa15.11■□□□□ 0.01
SQSTM1-204ENST00000453046 CKLFQ9UBR5 152 aa15.11■□□□□ 0.01
SQSTM1-204ENST00000453046 V9GYS6 101 aa15.11■□□□□ 0.01
SQSTM1-204ENST00000453046 PPIAL4EA0A075B759 164 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 PPIAL4CA0A0B4J2A2 164 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 IGHV3-64DA0A0J9YX35 117 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 hCG_38984A0A1B0GV85 526 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 LRRC30A6NM36 301 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 PPIAL4DF5H284 164 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 F5H5P2 479 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 PIN1P1O15428 100 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 PPIAL4FP0DN26 164 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 HILS1P60008 231 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 ACTG1P63261 375 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 GK2Q14410 553 aaPredicted RBP15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 ESCO2Q56NI9 601 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 C12orf54Q6X4T0 127 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 PGAP1Q75T13 922 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 TPRA1Q86W33 373 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 PARP16Q8N5Y8 322 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 OR14K1Q8NGZ2 314 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 SGK3Q96BR1 496 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 LYZL4Q96KX0 146 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 SLITRK2Q9H156 845 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 PPIL3Q9H2H8 161 aaKnown RBP15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 SNTG1Q9NSN8 517 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 ARHGAP32A7KAX9 2087 aa15.1■□□□□ 0.01
SQSTM1-204ENST00000453046 H3BSH0 61 aa15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 TRIM77I1YAP6 450 aa15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 MLNRO43193 412 aa15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 CDRT1O95170 752 aa15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 ZNF205O95201 554 aa15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 CYB5R3P00387 301 aaPredicted RBP15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 ZNF20P17024 532 aa15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 ZNF182P17025 639 aaPredicted RBP15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 FPR2P25090 351 aa15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 SDC2P34741 201 aa15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 PRSS12P56730 875 aa15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 OR8B8Q15620 311 aa15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 MRPL21Q7Z2W9 205 aaKnown RBP15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 MOGAT3Q86VF5 341 aa15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 C1orf87Q8N0U7 546 aa15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 OR2AE1Q8NHA4 323 aa15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 SLC6A7Q99884 636 aa15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 MMP26Q9NRE1 261 aa15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 OR5V1Q9UGF6 321 aa15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 OPN4Q9UHM6 478 aa15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 FOXJ3Q9UPW0 622 aa15.09■□□□□ 0.01
SQSTM1-204ENST00000453046 SHISA3A0PJX4 238 aa15.08■□□□□ 0
SQSTM1-204ENST00000453046 IRF2P14316 349 aa15.08■□□□□ 0
SQSTM1-204ENST00000453046 SOX6P35712 828 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms