RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 RTL8AQ9BWD3 113 aa11.37□□□□□ -0.59
PRPF39-202ENST00000424478 C1orf123Q9NWV4 160 aa11.37□□□□□ -0.59
PRPF39-202ENST00000424478 MTCH1Q9NZJ7 389 aa11.37□□□□□ -0.59
PRPF39-202ENST00000424478 CYB5R3P00387 301 aaPredicted RBP11.37□□□□□ -0.59
PRPF39-202ENST00000424478 BCL3P20749 454 aa11.37□□□□□ -0.59
PRPF39-202ENST00000424478 PTGFRP43088 359 aa11.37□□□□□ -0.59
PRPF39-202ENST00000424478 ZP1P60852 638 aa11.37□□□□□ -0.59
PRPF39-202ENST00000424478 GNG3P63215 75 aa11.37□□□□□ -0.59
PRPF39-202ENST00000424478 OR5T2Q8NGG2 359 aa11.37□□□□□ -0.59
PRPF39-202ENST00000424478 OR5A2Q8NGI9 324 aa11.37□□□□□ -0.59
PRPF39-202ENST00000424478 OR51F2Q8NH61 342 aa11.37□□□□□ -0.59
PRPF39-202ENST00000424478 PHYHIPQ92561 330 aa11.37□□□□□ -0.59
PRPF39-202ENST00000424478 SLC25A28Q96A46 364 aa11.37□□□□□ -0.59
PRPF39-202ENST00000424478 OR51I2Q9H344 312 aa11.37□□□□□ -0.59
PRPF39-202ENST00000424478 ZANQ9Y493 2812 aa11.37□□□□□ -0.59
PRPF39-202ENST00000424478 HPGDSO60760 199 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 RAB11BQ15907 218 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 LAX1Q8IWV1 398 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 IZUMO1Q8IYV9 350 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 ITFG2Q969R8 447 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 SPSB1Q96BD6 273 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 C10orf35Q96D05 121 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 OR5V1Q9UGF6 321 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 IGHV3OR15-7A0A075B7D8 119 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 VSTM5A8MXK1 200 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 AIPO00170 330 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 PDCD5O14737 125 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 EGR1P18146 543 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 CEBPDP49716 269 aaPredicted RBP11.36□□□□□ -0.59
PRPF39-202ENST00000424478 ATP1B3P54709 279 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 C2orf76Q3KRA6 126 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 ZBTB37Q5TC79 503 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 C11orf71Q6IPW1 123 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 TPRA1Q86W33 373 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 MCFD2Q8NI22 146 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 CCL17Q92583 94 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 CXXC4Q9H2H0 198 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 CBLN4Q9NTU7 201 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 ZNF701M0R085 212 aaPredicted RBP11.36□□□□□ -0.59
PRPF39-202ENST00000424478 SLC17A2O00624 439 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 PRKACBP22694 351 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 TUBG1P23258 451 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 PDZK1IP1Q13113 114 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 EFNB3Q15768 340 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 BRICD5Q6PL45 260 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 LHFPL2Q6ZUX7 228 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 FAM3DQ96BQ1 224 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 C1orf147Q96MC9 270 aaPredicted RBP11.36□□□□□ -0.59
PRPF39-202ENST00000424478 NICN1Q9BSH3 213 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 SAP30LQ9HAJ7 183 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 GCM1Q9NP62 436 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 TUBG2Q9NRH3 451 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 DECR2Q9NUI1 292 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 PLEKHA6Q9Y2H5 1048 aa11.36□□□□□ -0.59
PRPF39-202ENST00000424478 PDZD2O15018 2839 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 TRIM64BA6NI03 449 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 HTR3BO95264 441 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 ARSBP15848 533 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 UNC119Q13432 240 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 CARTPTQ16568 116 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 PIGYQ3MUY2 71 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 AGAP6Q5VW22 663 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 C1orf174Q8IYL3 243 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 SAMD12Q8N8I0 201 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 DEFB108BQ8NET1 73 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 AQP3Q92482 292 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 TRAF4Q9BUZ4 470 aaPredicted RBP11.35□□□□□ -0.59
PRPF39-202ENST00000424478 ABCB9Q9NP78 766 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 STEAP1Q9UHE8 339 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 CRTAPO75718 401 aaPredicted RBP11.35□□□□□ -0.59
PRPF39-202ENST00000424478 KDM4BO94953 1096 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 VSIG8P0DPA2 414 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 PTHLHP12272 177 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 FAM166AQ6J272 317 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 NKAIN3Q8N8D7 197 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 CCDC54Q8NEL0 328 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 THRSPQ92748 146 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 SMURF1Q9HCE7 757 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 NKIRAS2Q9NYR9 191 aa11.35□□□□□ -0.59
PRPF39-202ENST00000424478 TMEM272A0A1B0GTI8 110 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 MPIG6BO95866 241 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 ERCC1P07992 297 aaPredicted RBP11.34□□□□□ -0.59
PRPF39-202ENST00000424478 COL8A2P25067 703 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 WDR82Q6UXN9 313 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 BCL7BQ9BQE9 202 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 ZMAT3Q9HA38 289 aaKnown RBP11.34□□□□□ -0.59
PRPF39-202ENST00000424478 ZNF469Q96JG9 3925 aaPredicted RBP11.34□□□□□ -0.59
PRPF39-202ENST00000424478 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.34□□□□□ -0.59
PRPF39-202ENST00000424478 MEX3AA1L020 520 aaKnown RBP11.34□□□□□ -0.59
PRPF39-202ENST00000424478 SOX6P35712 828 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 PNLDC1Q8NA58 520 aaKnown RBP11.34□□□□□ -0.59
PRPF39-202ENST00000424478 LRRC29Q8WV35 223 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 GCDHQ92947 438 aaPredicted RBP11.34□□□□□ -0.59
PRPF39-202ENST00000424478 ING3Q9NXR8 418 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 PPP1R3CQ9UQK1 317 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 A0A075B6Q4 140 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 MEGF11A6BM72 1044 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 OR5B21A6NL26 309 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 HSPB6O14558 160 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 EIF4EP06730 217 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms