RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 IGHV2-70P01814 119 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 ADH4P08319 380 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 ZNF20P17024 532 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 CCL1P22362 96 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 TUBG1P23258 451 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 CALRP27797 417 aaKnown RBP8.67□□□□□ -1.02
NEDD8-202ENST00000396828 SERPINB10P48595 397 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 UBA52P62987 128 aaKnown RBP8.67□□□□□ -1.02
NEDD8-202ENST00000396828 PRKDCP78527 4128 aaKnown RBP8.67□□□□□ -1.02
NEDD8-202ENST00000396828 INSL4Q14641 139 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 MOGQ16653 247 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 GLYATL3Q5SZD4 288 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 MRPL21Q7Z2W9 205 aaKnown RBP8.67□□□□□ -1.02
NEDD8-202ENST00000396828 SERPINA12Q8IW75 414 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 SIGLECL1Q8N7X8 197 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 OR51A4Q8NGJ6 313 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 SGK3Q96BR1 496 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 TIMD4Q96H15 378 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 FAM71F1Q96KD3 344 aaPredicted RBP8.67□□□□□ -1.02
NEDD8-202ENST00000396828 ZNF48Q96MX3 618 aaPredicted RBP8.67□□□□□ -1.02
NEDD8-202ENST00000396828 DERL3Q96Q80 235 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 SUCNR1Q9BXA5 334 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 DCSTAMPQ9H295 470 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 TCF7L1Q9HCS4 588 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 NOX4Q9NPH5 578 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 TUBG2Q9NRH3 451 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 ZNF319Q9P2F9 582 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 ZNF69Q9UC07 566 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 NPTNQ9Y639 398 aa8.67□□□□□ -1.02
NEDD8-202ENST00000396828 TRAV1-2A0A0B4J238 106 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 A0A1B0GTI1 187 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 A0A1W2PPK0 400 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 DHRS7CA6NNS2 312 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 PDCD5O14737 125 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 DHRS3O75911 302 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 CDRT1O95170 752 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 IGLV3-1P01715 115 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 CD55P08174 381 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 UCHL1P09936 223 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 SRMP19623 302 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 SOX6P35712 828 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 GNALP38405 381 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 MAP2K3P46734 347 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 MTNR1BP49286 362 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 TNFAIP6P98066 277 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-202ENST00000396828 SCGB2A2Q13296 93 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 SPCS2Q15005 226 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 CNPY1Q3B7I2 92 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 PGAP1Q75T13 922 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 TPRA1Q86W33 373 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 BPIFB2Q8N4F0 458 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 PLPP7Q8NBV4 271 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 OR5D14Q8NGL3 314 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 OR10AC1Q8NH08 325 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 OR2AE1Q8NHA4 323 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 NDNFQ8TB73 568 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 SPSB4Q96A44 273 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 FGGYQ96C11 551 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 C10orf35Q96D05 121 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 LYZL4Q96KX0 146 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 RNF167Q9H6Y7 350 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 SNTG1Q9NSN8 517 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 STARD10Q9Y365 291 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 V9GYS6 101 aa8.66□□□□□ -1.02
NEDD8-202ENST00000396828 IGHV3OR16-10A0A075B7F0 116 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 TRBV5-7A0A0A0MS05 114 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 C5orf63A6NC05 138 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 TIMM8AO60220 97 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-202ENST00000396828 ZNF205O95201 554 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 IL1AP01583 271 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 OCMP0CE72 109 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-202ENST00000396828 SDC2P34741 201 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 TGFBR1P36897 503 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 PPP3R1P63098 170 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 ZNF92Q03936 586 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 MXD1Q05195 221 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 RIPPLY1Q0D2K3 151 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 ZNF154Q13106 437 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 GK2Q14410 553 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-202ENST00000396828 HLXQ14774 488 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-202ENST00000396828 ZMYND11Q15326 602 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 DGUOKQ16854 277 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 FTMTQ8N4E7 242 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 PARP16Q8N5Y8 322 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 OR2Z1Q8NG97 314 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 OR14K1Q8NGZ2 314 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 ITLN1Q8WWA0 313 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 CMBLQ96DG6 245 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 JMJD8Q96S16 334 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 DCUN1D5Q9BTE7 237 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 EGLN1Q9GZT9 426 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 PATZ1Q9HBE1 687 aaKnown RBP8.65□□□□□ -1.02
NEDD8-202ENST00000396828 CYSLTR2Q9NS75 346 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 TMEM106BQ9NUM4 274 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 PTTG3PQ9NZH4 202 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 PURGQ9UJV8 347 aaKnown RBP8.65□□□□□ -1.02
NEDD8-202ENST00000396828 ZDHHC8Q9ULC8 765 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 FOXJ3Q9UPW0 622 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 PIGLQ9Y2B2 252 aa8.65□□□□□ -1.02
NEDD8-202ENST00000396828 IGHV3-64DA0A0J9YX35 117 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms