RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 RBAKQ9NYW8 714 aaPredicted RBP2.03□□□□□ -2.08
PTPRC-205ENST00000391970 STOX2Q9P2F5 926 aaPredicted RBP2.03□□□□□ -2.08
PTPRC-205ENST00000391970 DEC1Q9P2X7 70 aa2.03□□□□□ -2.08
PTPRC-205ENST00000391970 SHPKQ9UHJ6 478 aa2.03□□□□□ -2.08
PTPRC-205ENST00000391970 NAGKQ9UJ70 344 aa2.03□□□□□ -2.08
PTPRC-205ENST00000391970 SNX24Q9Y343 169 aa2.03□□□□□ -2.08
PTPRC-205ENST00000391970 AP4S1Q9Y587 144 aa2.03□□□□□ -2.08
PTPRC-205ENST00000391970 F11RQ9Y624 299 aaKnown RBP2.03□□□□□ -2.08
PTPRC-205ENST00000391970 SAR1BQ9Y6B6 198 aa2.03□□□□□ -2.08
PTPRC-205ENST00000391970 V9GYQ6 96 aa2.03□□□□□ -2.08
PTPRC-205ENST00000391970 CDK5RAP2Q96SN8 1893 aa2.03□□□□□ -2.09
PTPRC-205ENST00000391970 DOCK2Q92608 1830 aa2.03□□□□□ -2.09
PTPRC-205ENST00000391970 KDM3BQ7LBC6 1761 aa2.03□□□□□ -2.09
PTPRC-205ENST00000391970 RREB1Q92766 1687 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 FAM208AQ9UK61 1670 aaKnown RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 COL16A1Q07092 1604 aaPredicted RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 PRRC2AP48634 2157 aaKnown RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 CRB1P82279 1406 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 MYH9P35579 1960 aaKnown RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 MYH10P35580 1976 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 RAB19A4D1S5 217 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 GABRR3A8MPY1 467 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 C9JVG2 144 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 H7C417 338 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 K7EP13 123 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 PSMD12O00232 456 aaPredicted RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 SULT1C2O00338 296 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 XKRYO14609 159 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 RAB29O14966 203 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 MRPS12O15235 138 aaKnown RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 NUPL2O15504 423 aaKnown RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 UGT2B11O75310 529 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 ENTPD5O75356 428 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 CA11O75493 328 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 EEDO75530 441 aaKnown RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 SLC22A5O76082 557 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 VAPBO95292 243 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 C6orf47O95873 294 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 CSTAP01040 98 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 IGLV2-23P01705 113 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 C1QBP02746 253 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 IFNA6P05013 189 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 NBEAP1P0C6P0 100 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 SMIM10L1P0DMW3 83 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 RALBP11234 206 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 FOLR1P15328 257 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 WARSP23381 471 aaKnown RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 SLC6A1P30531 599 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 OR1E1P30953 314 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 ARR3P36575 388 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 NUP62P37198 522 aaPredicted RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 AQP2P41181 271 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 MAGEA1P43355 309 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 GPR4P46093 362 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 RFX3P48380 749 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 NMUP48645 174 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 GNG10P50151 68 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 SSR4P51571 173 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 NCBP2P52298 156 aaKnown RBP eCLIP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 CEBPGP53567 150 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 EMP2P54851 167 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 RPS20P60866 119 aaKnown RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 SNAP25P60880 206 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 CDC42P60953 191 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 ERVS71-1P61550 626 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 YWHAGP61981 247 aaKnown RBP eCLIP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 RAP1AP62834 184 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 RPS21P63220 83 aaKnown RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 IRF8Q02556 426 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 STX4Q12846 297 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 BNIP2Q12982 314 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 SLC39A6Q13433 755 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 ZNHIT3Q15649 155 aaPredicted RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 EXOC3L4Q17RC7 722 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 ZNF181Q2M3W8 571 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 NDUFAF6Q330K2 333 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 PTPN20Q4JDL3 420 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 HSD17B12Q53GQ0 312 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 PIGGQ5H8A4 983 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 HACD4Q5VWC8 232 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 MLIPQ5VWP3 458 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 CARD17Q5XLA6 110 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 SLC25A25Q6KCM7 469 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 APOBEC3HQ6NTF7 200 aaKnown RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 LYPD2Q6UXB3 125 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 LINC00173Q6ZV60 143 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 H2AFVQ71UI9 128 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 RAB43Q86YS6 212 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 SLC35F6Q8N357 371 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 STX19Q8N4C7 294 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 GDPD1Q8N9F7 314 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 FBXL13Q8NEE6 735 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 OR4M1Q8NGD0 313 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 OR2L8Q8NGY9 312 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 LKAAEAR1Q8TD35 194 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 CD300LFQ8TDQ1 290 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 CXorf40AQ8TE69 158 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 PHF10Q8WUB8 498 aaKnown RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 RAB2BQ8WUD1 216 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 SFT2D1Q8WV19 159 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms