RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 RPL22L1Q6P5R6 122 aaKnown RBP5.05□□□□□ -1.6
RFX4-201ENST00000229387 BCDIN3DQ7Z5W3 292 aaKnown RBP5.05□□□□□ -1.6
RFX4-201ENST00000229387 NIT1Q86X76 327 aa5.05□□□□□ -1.6
RFX4-201ENST00000229387 SHISA5Q8N114 240 aa5.05□□□□□ -1.6
RFX4-201ENST00000229387 SLC26A10Q8NG04 563 aa5.05□□□□□ -1.6
RFX4-201ENST00000229387 OR10H4Q8NGA5 316 aa5.05□□□□□ -1.6
RFX4-201ENST00000229387 OR4P4Q8NGL7 312 aa5.05□□□□□ -1.6
RFX4-201ENST00000229387 NFKBIDQ8NI38 313 aa5.05□□□□□ -1.6
RFX4-201ENST00000229387 RAB40AQ8WXH6 277 aa5.05□□□□□ -1.6
RFX4-201ENST00000229387 RAB8BQ92930 207 aa5.05□□□□□ -1.6
RFX4-201ENST00000229387 AQP10Q96PS8 301 aa5.05□□□□□ -1.6
RFX4-201ENST00000229387 TBX15Q96SF7 602 aa5.05□□□□□ -1.6
RFX4-201ENST00000229387 METTL7AQ9H8H3 244 aa5.05□□□□□ -1.6
RFX4-201ENST00000229387 MBNL1Q9NR56 388 aaKnown RBP5.05□□□□□ -1.6
RFX4-201ENST00000229387 SLC2A4RGQ9NR83 387 aa5.05□□□□□ -1.6
RFX4-201ENST00000229387 TMEM38BQ9NVV0 291 aa5.05□□□□□ -1.6
RFX4-201ENST00000229387 ANKRD36A6QL64 1941 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 COL6A3P12111 3177 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 NKX2-6A6NCS4 301 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 RBFOX2O43251 390 aaKnown RBP eCLIP5.04□□□□□ -1.6
RFX4-201ENST00000229387 TLX2O43763 284 aaPredicted RBP5.04□□□□□ -1.6
RFX4-201ENST00000229387 FCMRO60667 390 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 RAMP1O60894 148 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 TIAF1O95411 115 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 H1F0P07305 194 aaKnown RBP5.04□□□□□ -1.6
RFX4-201ENST00000229387 ADH5P11766 374 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 DCTDP32321 178 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 CEACAM3P40198 252 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 BLKP51451 505 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 LGALS4P56470 323 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 FAM3AP98173 230 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 C9orf50Q5SZB4 431 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 TRAT1Q6PIZ9 186 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 ZNF322Q6U7Q0 402 aaPredicted RBP5.04□□□□□ -1.6
RFX4-201ENST00000229387 H1FNTQ75WM6 255 aaPredicted RBP5.04□□□□□ -1.6
RFX4-201ENST00000229387 COMMD6Q7Z4G1 85 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 WFDC8Q8IUA0 241 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 LFNGQ8NES3 379 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 OR52L1Q8NGH7 329 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 GPX8Q8TED1 209 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 HMGB4Q8WW32 186 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 SPRYD4Q8WW59 207 aaPredicted RBP5.04□□□□□ -1.6
RFX4-201ENST00000229387 RAB1CQ92928 201 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 LMLNQ96KR4 655 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 HIST1H2AAQ96QV6 131 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 ABHD14AQ9BUJ0 271 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 PLEKHJ1Q9NW61 149 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 BET1LQ9NYM9 111 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 TAC3Q9UHF0 121 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 KCNK6Q9Y257 313 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 MRPS16Q9Y3D3 137 aaKnown RBP5.04□□□□□ -1.6
RFX4-201ENST00000229387 NOTCH4Q99466 2003 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 IGLON5A6NGN9 336 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 ZNF727A8MUV8 499 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 J3QR06 171 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 RAB27BO00194 218 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 LAMTOR5O43504 91 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 LRP3O75074 770 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 RBMXL2O75526 392 aaKnown RBP5.04□□□□□ -1.6
RFX4-201ENST00000229387 TOX4O94842 621 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 PPIBP23284 216 aaKnown RBP5.04□□□□□ -1.6
RFX4-201ENST00000229387 PPICP45877 212 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 SLC6A8P48029 635 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 FOXL2P58012 376 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 TAS2R50P59544 299 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 RAB30Q15771 203 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 FAM78AQ5JUQ0 283 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 Q6ZRG5 221 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 ZNF547Q8IVP9 402 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 UBALD2Q8IYN6 164 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 KXD1Q9BQD3 176 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 NICN1Q9BSH3 213 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 RAB11FIP5Q9BXF6 653 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 NMES1Q9C002 83 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 MRPL22Q9NWU5 206 aaKnown RBP5.04□□□□□ -1.6
RFX4-201ENST00000229387 FUT9Q9Y231 359 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 BRWD1Q9NSI6 2320 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 CKAP5Q14008 2032 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 LINC01553A4QN01 128 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 H3BQ15 152 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 SLC31A1O15431 190 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 ZNF354AO60765 605 aaPredicted RBP5.04□□□□□ -1.6
RFX4-201ENST00000229387 GCM2O75603 506 aaPredicted RBP5.04□□□□□ -1.6
RFX4-201ENST00000229387 CATP04040 527 aaKnown RBP5.04□□□□□ -1.6
RFX4-201ENST00000229387 GAPDHP04406 335 aaKnown RBP5.04□□□□□ -1.6
RFX4-201ENST00000229387 C8orf89P0DMQ9 161 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 ACP5P13686 325 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 CEACAM1P13688 526 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 SNRPBP14678 240 aaKnown RBP5.04□□□□□ -1.6
RFX4-201ENST00000229387 ST6GAL1P15907 406 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 RAB38P57729 211 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 CKS1BP61024 79 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 CYCSP99999 105 aaKnown RBP5.04□□□□□ -1.6
RFX4-201ENST00000229387 FOXF1Q12946 379 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 HSPB3Q12988 150 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 TDRG1Q3Y452 100 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 TMEM176BQ3YBM2 270 aaPredicted RBP5.04□□□□□ -1.6
RFX4-201ENST00000229387 ANKRD16Q6P6B7 361 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 TGIF2LYQ8IUE0 185 aa5.04□□□□□ -1.6
RFX4-201ENST00000229387 ZNF101Q8IZC7 436 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms