RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 CPT2P23786 658 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 PAX2Q02962 417 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 STUMQ69YW2 141 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 IZUMO2Q6UXV1 221 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 TMPRSS11AQ6ZMR5 421 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 AHSA2Q719I0 299 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 ZNF573Q86YE8 665 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 CALHM1Q8IU99 346 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 EGFL6Q8IUX8 553 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 FAM216BQ8N7L0 139 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 OR5AK2Q8NH90 309 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 GATAD2BQ8WXI9 593 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 PLCXD1Q9NUJ7 323 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 SLC7A11Q9UPY5 501 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 INSIG2Q9Y5U4 225 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 MXRA5Q9NR99 2828 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 IGHV2-70DA0A0C4DH43 119 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 IGKV1-9A0A0C4DH69 117 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 TMEM212A6NML5 194 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 J3QLI3 93 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 DVL1O14640 695 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 PLATP00750 562 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 SERPINA3P01011 423 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 CCDC159P0C7I6 412 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 PIPP12273 146 aaPredicted RBP10.53□□□□□ -0.72
LSM5-201ENST00000223084 ATF1P18846 271 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 C21orf33P30042 268 aaPredicted RBP10.53□□□□□ -0.72
LSM5-201ENST00000223084 TGM4P49221 684 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 MRPL28Q13084 256 aaKnown RBP10.53□□□□□ -0.72
LSM5-201ENST00000223084 IKZF1Q13422 519 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 CDK5R1Q15078 307 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 C6orf141Q5SZD1 244 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 RNF144BQ7Z419 303 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 STX19Q8N4C7 294 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 ZFP41Q8N8Y5 198 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 POC1AQ8NBT0 407 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 RAB40AQ8WXH6 277 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 ST8SIA4Q92187 359 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 RGP1Q92546 391 aaPredicted RBP10.53□□□□□ -0.72
LSM5-201ENST00000223084 SGCDQ92629 289 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 DACT3Q96B18 629 aaPredicted RBP10.53□□□□□ -0.72
LSM5-201ENST00000223084 TMIGD2Q96BF3 282 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 C10orf35Q96D05 121 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 NUDT16L1Q9BRJ7 211 aaKnown RBP10.53□□□□□ -0.72
LSM5-201ENST00000223084 COMMD4Q9H0A8 199 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 VCX3BQ9H321 246 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 CHCHD3Q9NX63 227 aaKnown RBP10.53□□□□□ -0.72
LSM5-201ENST00000223084 BABAM2Q9NXR7 383 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 CNOT2Q9NZN8 540 aaKnown RBP10.53□□□□□ -0.72
LSM5-201ENST00000223084 NLKQ9UBE8 527 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 KAAG1Q9UBP8 84 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 AUP1Q9Y679 476 aa10.53□□□□□ -0.72
LSM5-201ENST00000223084 IGKV1D-17A0A075B6S4 117 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 OR2AT4A6NND4 320 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 SLC1A7O00341 560 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 IFNA2P01563 188 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 PGA5P0DJD9 388 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 PSG2P11465 335 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 MPZP25189 248 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 GABRA2P47869 451 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 NPY4RP50391 375 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 FUT6P51993 359 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 SRSF2Q01130 221 aaKnown RBP10.52□□□□□ -0.73
LSM5-201ENST00000223084 PAX8Q06710 450 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 RIPK1Q13546 671 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 DOC2BQ14184 412 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 RPL22L1Q6P5R6 122 aaKnown RBP10.52□□□□□ -0.73
LSM5-201ENST00000223084 ACP7Q6ZNF0 438 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 UTS2BQ765I0 119 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 C1QL2Q7Z5L3 287 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 ZNF485Q8NCK3 441 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 OR52N1Q8NH53 320 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 ANGPTL6Q8NI99 470 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 TSEN15Q8WW01 171 aaKnown RBP10.52□□□□□ -0.73
LSM5-201ENST00000223084 PP6455Q8WZ26 134 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 SLAMF9Q96A28 289 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 RFT1Q96AA3 541 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 C12orf43Q96C57 262 aaKnown RBP10.52□□□□□ -0.73
LSM5-201ENST00000223084 BORCS8Q96FH0 119 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 GAFA1Q96PS6 74 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 SPACA5Q96QH8 159 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 FKBP14Q9NWM8 211 aa10.52□□□□□ -0.73
LSM5-201ENST00000223084 KIR2DS1A0A191URI9 304 aa10.51□□□□□ -0.73
LSM5-201ENST00000223084 NKX6-3A6NJ46 265 aa10.51□□□□□ -0.73
LSM5-201ENST00000223084 RFPL4AA6NLU0 287 aa10.51□□□□□ -0.73
LSM5-201ENST00000223084 PTGES3LE9PB15 166 aa10.51□□□□□ -0.73
LSM5-201ENST00000223084 RFPL4AL1F8VTS6 287 aa10.51□□□□□ -0.73
LSM5-201ENST00000223084 OGG1O15527 345 aa10.51□□□□□ -0.73
LSM5-201ENST00000223084 NXPH2O95156 264 aa10.51□□□□□ -0.73
LSM5-201ENST00000223084 MYF6P23409 242 aa10.51□□□□□ -0.73
LSM5-201ENST00000223084 AZGP1P25311 298 aaKnown RBP10.51□□□□□ -0.73
LSM5-201ENST00000223084 SOX2P48431 317 aa10.51□□□□□ -0.73
LSM5-201ENST00000223084 POU3F4P49335 361 aa10.51□□□□□ -0.73
LSM5-201ENST00000223084 CEBPDP49716 269 aaPredicted RBP10.51□□□□□ -0.73
LSM5-201ENST00000223084 MED21Q13503 144 aa10.51□□□□□ -0.73
LSM5-201ENST00000223084 CNN3Q15417 329 aaKnown RBP10.51□□□□□ -0.73
LSM5-201ENST00000223084 DGUOKQ16854 277 aa10.51□□□□□ -0.73
LSM5-201ENST00000223084 CCDC58Q4VC31 144 aa10.51□□□□□ -0.73
LSM5-201ENST00000223084 ATPAF1Q5TC12 328 aaPredicted RBP10.51□□□□□ -0.73
LSM5-201ENST00000223084 BTNL3Q6UXE8 466 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms