RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 SOX21Q9Y651 276 aaPredicted RBP24.28■■□□□ 1.48
RAB40C-211ENST00000568586 BAMBIQ13145 260 aa24.27■■□□□ 1.48
RAB40C-211ENST00000568586 CLVS2Q5SYC1 327 aa24.27■■□□□ 1.48
RAB40C-211ENST00000568586 FGFRL1Q8N441 504 aa24.27■■□□□ 1.48
RAB40C-211ENST00000568586 YIPF7Q8N8F6 280 aa24.27■■□□□ 1.48
RAB40C-211ENST00000568586 OR5T2Q8NGG2 359 aa24.27■■□□□ 1.48
RAB40C-211ENST00000568586 C8orf46Q8TAG6 207 aa24.27■■□□□ 1.48
RAB40C-211ENST00000568586 RORBQ92753 470 aa24.27■■□□□ 1.48
RAB40C-211ENST00000568586 TBX5Q99593 518 aa24.27■■□□□ 1.48
RAB40C-211ENST00000568586 PCGF1Q9BSM1 259 aa24.27■■□□□ 1.48
RAB40C-211ENST00000568586 GTF2A1LQ9UNN4 478 aa24.27■■□□□ 1.48
RAB40C-211ENST00000568586 SLC22A13Q9Y226 551 aa24.27■■□□□ 1.48
RAB40C-211ENST00000568586 KPTNQ9Y664 436 aa24.27■■□□□ 1.48
RAB40C-211ENST00000568586 CENPVL3A0A0U1RRI6 287 aa24.26■■□□□ 1.47
RAB40C-211ENST00000568586 J3QRE1 110 aa24.26■■□□□ 1.47
RAB40C-211ENST00000568586 NDUFB3O43676 98 aa24.26■■□□□ 1.47
RAB40C-211ENST00000568586 APOL3O95236 402 aa24.26■■□□□ 1.47
RAB40C-211ENST00000568586 PDCD1Q15116 288 aa24.26■■□□□ 1.47
RAB40C-211ENST00000568586 OCLNQ16625 522 aa24.26■■□□□ 1.47
RAB40C-211ENST00000568586 METTL11BQ5VVY1 283 aa24.26■■□□□ 1.47
RAB40C-211ENST00000568586 PLCXD3Q63HM9 321 aa24.26■■□□□ 1.47
RAB40C-211ENST00000568586 CBR4Q8N4T8 237 aa24.26■■□□□ 1.47
RAB40C-211ENST00000568586 OR10H4Q8NGA5 316 aa24.26■■□□□ 1.47
RAB40C-211ENST00000568586 MED30Q96HR3 178 aa24.26■■□□□ 1.47
RAB40C-211ENST00000568586 GAFA1Q96PS6 74 aa24.26■■□□□ 1.47
RAB40C-211ENST00000568586 IMPAD1Q9NX62 359 aa24.26■■□□□ 1.47
RAB40C-211ENST00000568586 RASL12Q9NYN1 266 aa24.26■■□□□ 1.47
RAB40C-211ENST00000568586 NLKQ9UBE8 527 aa24.26■■□□□ 1.47
RAB40C-211ENST00000568586 NBEAL1Q6ZS30 2694 aa24.26■■□□□ 1.47
RAB40C-211ENST00000568586 SIGLEC5O15389 551 aa24.25■■□□□ 1.47
RAB40C-211ENST00000568586 RNASE1P07998 156 aaKnown RBP24.25■■□□□ 1.47
RAB40C-211ENST00000568586 ACAA1P09110 424 aaPredicted RBP24.25■■□□□ 1.47
RAB40C-211ENST00000568586 GLRA1P23415 457 aa24.25■■□□□ 1.47
RAB40C-211ENST00000568586 ZNF85Q03923 595 aa24.25■■□□□ 1.47
RAB40C-211ENST00000568586 CDONQ4KMG0 1287 aa24.25■■□□□ 1.47
RAB40C-211ENST00000568586 LRRC10Q5BKY1 277 aa24.25■■□□□ 1.47
RAB40C-211ENST00000568586 MEDAGQ5VYS4 303 aa24.25■■□□□ 1.47
RAB40C-211ENST00000568586 BRD3OSQ6XYD6 125 aa24.25■■□□□ 1.47
RAB40C-211ENST00000568586 RNF166Q96A37 237 aaPredicted RBP24.25■■□□□ 1.47
RAB40C-211ENST00000568586 SNTG1Q9NSN8 517 aa24.25■■□□□ 1.47
RAB40C-211ENST00000568586 ZNF222Q9UK12 451 aa24.25■■□□□ 1.47
RAB40C-211ENST00000568586 PQLC2LA1A4F0 135 aa24.24■■□□□ 1.47
RAB40C-211ENST00000568586 OR2AT4A6NND4 320 aa24.24■■□□□ 1.47
RAB40C-211ENST00000568586 NOS1APO75052 506 aaPredicted RBP24.24■■□□□ 1.47
RAB40C-211ENST00000568586 ENTPD6O75354 484 aa24.24■■□□□ 1.47
RAB40C-211ENST00000568586 RPP14O95059 124 aaKnown RBP24.24■■□□□ 1.47
RAB40C-211ENST00000568586 ATP6V1E1P36543 226 aa24.24■■□□□ 1.47
RAB40C-211ENST00000568586 ARF6P62330 175 aa24.24■■□□□ 1.47
RAB40C-211ENST00000568586 IL13RA1P78552 427 aa24.24■■□□□ 1.47
RAB40C-211ENST00000568586 SLC9A3R2Q15599 337 aa24.24■■□□□ 1.47
RAB40C-211ENST00000568586 DMRTC1Q5HYR2 192 aa24.24■■□□□ 1.47
RAB40C-211ENST00000568586 HAGHLQ6PII5 290 aaPredicted RBP24.24■■□□□ 1.47
RAB40C-211ENST00000568586 CCDC54Q8NEL0 328 aa24.24■■□□□ 1.47
RAB40C-211ENST00000568586 DCTN5Q9BTE1 182 aa24.24■■□□□ 1.47
RAB40C-211ENST00000568586 S100A14Q9HCY8 104 aa24.24■■□□□ 1.47
RAB40C-211ENST00000568586 IGKV1D-17A0A075B6S4 117 aa24.23■■□□□ 1.47
RAB40C-211ENST00000568586 NKX6-3A6NJ46 265 aa24.23■■□□□ 1.47
RAB40C-211ENST00000568586 HKR1P10072 659 aa24.23■■□□□ 1.47
RAB40C-211ENST00000568586 CAV3P56539 151 aa24.23■■□□□ 1.47
RAB40C-211ENST00000568586 GMFBP60983 142 aa24.23■■□□□ 1.47
RAB40C-211ENST00000568586 DGUOKQ16854 277 aa24.23■■□□□ 1.47
RAB40C-211ENST00000568586 ZNF573Q86YE8 665 aa24.23■■□□□ 1.47
RAB40C-211ENST00000568586 KIR3DL3Q8N743 410 aa24.23■■□□□ 1.47
RAB40C-211ENST00000568586 TMIGD2Q96BF3 282 aa24.23■■□□□ 1.47
RAB40C-211ENST00000568586 PSG2P11465 335 aa24.22■■□□□ 1.47
RAB40C-211ENST00000568586 SELLP14151 372 aa24.22■■□□□ 1.47
RAB40C-211ENST00000568586 MPZP25189 248 aa24.22■■□□□ 1.47
RAB40C-211ENST00000568586 CFPP27918 469 aa24.22■■□□□ 1.47
RAB40C-211ENST00000568586 IKZF1Q13422 519 aa24.22■■□□□ 1.47
RAB40C-211ENST00000568586 DEFB112Q30KQ8 113 aa24.22■■□□□ 1.47
RAB40C-211ENST00000568586 ZIK1Q3SY52 487 aaPredicted RBP24.22■■□□□ 1.47
RAB40C-211ENST00000568586 KCTD20Q7Z5Y7 419 aa24.22■■□□□ 1.47
RAB40C-211ENST00000568586 PRSS35Q8N3Z0 413 aa24.22■■□□□ 1.47
RAB40C-211ENST00000568586 POC1AQ8NBT0 407 aa24.22■■□□□ 1.47
RAB40C-211ENST00000568586 SLC25A28Q96A46 364 aa24.22■■□□□ 1.47
RAB40C-211ENST00000568586 SDSLQ96GA7 329 aa24.22■■□□□ 1.47
RAB40C-211ENST00000568586 MBOAT4Q96T53 435 aa24.22■■□□□ 1.47
RAB40C-211ENST00000568586 C9orf16Q9BUW7 83 aa24.22■■□□□ 1.47
RAB40C-211ENST00000568586 NOX4Q9NPH5 578 aa24.22■■□□□ 1.47
RAB40C-211ENST00000568586 J3QT63 122 aa24.21■■□□□ 1.47
RAB40C-211ENST00000568586 PGA5P0DJD9 388 aa24.21■■□□□ 1.47
RAB40C-211ENST00000568586 GABRB1P18505 474 aa24.21■■□□□ 1.47
RAB40C-211ENST00000568586 METAP1DQ6UB28 335 aaPredicted RBP24.21■■□□□ 1.47
RAB40C-211ENST00000568586 DUX5Q96PT3 197 aa24.21■■□□□ 1.47
RAB40C-211ENST00000568586 GPR173Q9NS66 373 aa24.21■■□□□ 1.47
RAB40C-211ENST00000568586 MAB21L2Q9Y586 359 aa24.21■■□□□ 1.47
RAB40C-211ENST00000568586 IGHV1-69DA0A0B4J2H0 117 aa24.2■■□□□ 1.46
RAB40C-211ENST00000568586 A0A1B0GVI7 797 aa24.2■■□□□ 1.46
RAB40C-211ENST00000568586 IGHV1-69P01742 117 aa24.2■■□□□ 1.46
RAB40C-211ENST00000568586 ACTC1P68032 377 aa24.2■■□□□ 1.46
RAB40C-211ENST00000568586 ACTA1P68133 377 aa24.2■■□□□ 1.46
RAB40C-211ENST00000568586 FDX2Q6P4F2 183 aa24.2■■□□□ 1.46
RAB40C-211ENST00000568586 C1orf122Q6ZSJ8 110 aa24.2■■□□□ 1.46
RAB40C-211ENST00000568586 PQLC1Q8N2U9 271 aa24.2■■□□□ 1.46
RAB40C-211ENST00000568586 GATAD2BQ8WXI9 593 aa24.2■■□□□ 1.46
RAB40C-211ENST00000568586 RNFT2Q96EX2 444 aa24.2■■□□□ 1.46
RAB40C-211ENST00000568586 SLC29A1Q99808 456 aa24.2■■□□□ 1.46
RAB40C-211ENST00000568586 SLC25A10Q9UBX3 287 aaPredicted RBP24.2■■□□□ 1.46
RAB40C-211ENST00000568586 EXOGQ9Y2C4 368 aaKnown RBP24.2■■□□□ 1.46
RAB40C-211ENST00000568586 MDFIC2A0A1B0GVS7 189 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms