RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 PPP3R1P63098 170 aa11.05□□□□□ -0.64
DDX11-227ENST00000544652 MPPED2Q15777 294 aa11.05□□□□□ -0.64
DDX11-227ENST00000544652 TIMM50Q3ZCQ8 353 aa11.05□□□□□ -0.64
DDX11-227ENST00000544652 PRAMEF6Q5VXH4 476 aa11.05□□□□□ -0.64
DDX11-227ENST00000544652 GPR141Q7Z602 305 aa11.05□□□□□ -0.64
DDX11-227ENST00000544652 LRRTM1Q86UE6 522 aa11.05□□□□□ -0.64
DDX11-227ENST00000544652 ANKRD13BQ86YJ7 626 aa11.05□□□□□ -0.64
DDX11-227ENST00000544652 CDH26Q8IXH8 852 aa11.05□□□□□ -0.64
DDX11-227ENST00000544652 TRMT10AQ8TBZ6 339 aaKnown RBP11.05□□□□□ -0.64
DDX11-227ENST00000544652 RDH5Q92781 318 aa11.05□□□□□ -0.64
DDX11-227ENST00000544652 YIPF5Q969M3 257 aa11.05□□□□□ -0.64
DDX11-227ENST00000544652 BORCS8Q96FH0 119 aa11.05□□□□□ -0.64
DDX11-227ENST00000544652 BARX1Q9HBU1 254 aaPredicted RBP11.05□□□□□ -0.64
DDX11-227ENST00000544652 NEK6Q9HC98 313 aa11.05□□□□□ -0.64
DDX11-227ENST00000544652 MYOZ1Q9NP98 299 aaPredicted RBP11.05□□□□□ -0.64
DDX11-227ENST00000544652 DOCK11Q5JSL3 2073 aa11.05□□□□□ -0.64
DDX11-227ENST00000544652 PDZD2O15018 2839 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 CR1P17927 2039 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 ANKRD17O75179 2603 aaKnown RBP11.04□□□□□ -0.64
DDX11-227ENST00000544652 TRAV1-2A0A0B4J238 106 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 IGHV1-69-2A0A0G2JMI3 117 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 FAM230AA0A1W2PPH8 454 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 SHISA3A0PJX4 238 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 MEGF11A6BM72 1044 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 TRIM64BA6NI03 449 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 IFNL4K9M1U5 179 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 TPD52L2O43399 206 aaKnown RBP11.04□□□□□ -0.64
DDX11-227ENST00000544652 RP2O75695 350 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 LY6HO94772 140 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 GRPP07492 148 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 DAOP14920 347 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 ADRA2CP18825 462 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 COL8A2P25067 703 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 CALRP27797 417 aaKnown RBP11.04□□□□□ -0.64
DDX11-227ENST00000544652 ATP1B3P54709 279 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 ATP5J2P56134 94 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 KISS1Q15726 138 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 C22orf42Q6IC83 251 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 DNM1P46Q6ZS02 220 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 SLC16A12Q6ZSM3 486 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 RNF144BQ7Z419 303 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 MOGAT3Q86VF5 341 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 ZNF573Q86YE8 665 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 CALHM1Q8IU99 346 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 NKAIN3Q8N8D7 197 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 SCCPDHQ8NBX0 429 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 OR52N4Q8NGI2 321 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 NPRL2Q8WTW4 380 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 RPL3LQ92901 407 aaKnown RBP11.04□□□□□ -0.64
DDX11-227ENST00000544652 CHCHD6Q9BRQ6 235 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 CENPOQ9BU64 300 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 PKIBQ9C010 78 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 TCF7L1Q9HCS4 588 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 DLL4Q9NR61 685 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 SNTG1Q9NSN8 517 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 PPP1R3CQ9UQK1 317 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 GSTK1Q9Y2Q3 226 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 ARID1AO14497 2285 aa11.04□□□□□ -0.64
DDX11-227ENST00000544652 PRRC2AP48634 2157 aaKnown RBP11.03□□□□□ -0.64
DDX11-227ENST00000544652 MAGEB3O15480 346 aa11.03□□□□□ -0.64
DDX11-227ENST00000544652 AIREO43918 545 aa11.03□□□□□ -0.64
DDX11-227ENST00000544652 GABARAPO95166 117 aa11.03□□□□□ -0.64
DDX11-227ENST00000544652 LHBP01229 141 aa11.03□□□□□ -0.64
DDX11-227ENST00000544652 MAS1P04201 325 aa11.03□□□□□ -0.64
DDX11-227ENST00000544652 HCKP08631 526 aa11.03□□□□□ -0.64
DDX11-227ENST00000544652 ACAA1P09110 424 aaPredicted RBP11.03□□□□□ -0.64
DDX11-227ENST00000544652 HAAOP46952 286 aa11.03□□□□□ -0.64
DDX11-227ENST00000544652 MTCP1P56278 107 aa11.03□□□□□ -0.64
DDX11-227ENST00000544652 ZP1P60852 638 aa11.03□□□□□ -0.64
DDX11-227ENST00000544652 IL24Q13007 206 aa11.03□□□□□ -0.64
DDX11-227ENST00000544652 WDR82Q6UXN9 313 aa11.03□□□□□ -0.64
DDX11-227ENST00000544652 TGIF2LYQ8IUE0 185 aa11.03□□□□□ -0.64
DDX11-227ENST00000544652 OR10Z1Q8NGY1 313 aa11.03□□□□□ -0.64
DDX11-227ENST00000544652 ZNF420Q8TAQ5 688 aaPredicted RBP11.03□□□□□ -0.64
DDX11-227ENST00000544652 AQP3Q92482 292 aa11.03□□□□□ -0.64
DDX11-227ENST00000544652 CPNE2Q96FN4 548 aaPredicted RBP11.03□□□□□ -0.64
DDX11-227ENST00000544652 PERPQ96FX8 193 aa11.03□□□□□ -0.64
DDX11-227ENST00000544652 SLITRK2Q9H156 845 aa11.03□□□□□ -0.64
DDX11-227ENST00000544652 FN3KRPQ9HA64 309 aa11.03□□□□□ -0.64
DDX11-227ENST00000544652 EXOSC4Q9NPD3 245 aaKnown RBP11.03□□□□□ -0.64
DDX11-227ENST00000544652 CACNG2Q9Y698 323 aa11.03□□□□□ -0.64
DDX11-227ENST00000544652 DSCAML1Q8TD84 2053 aa11.02□□□□□ -0.64
DDX11-227ENST00000544652 IGHV3-64DA0A0J9YX35 117 aa11.02□□□□□ -0.65
DDX11-227ENST00000544652 J3QT63 122 aa11.02□□□□□ -0.65
DDX11-227ENST00000544652 CDIPTO14735 213 aa11.02□□□□□ -0.65
DDX11-227ENST00000544652 SSX4O60224 188 aa11.02□□□□□ -0.65
DDX11-227ENST00000544652 CDC14BO60729 498 aa11.02□□□□□ -0.65
DDX11-227ENST00000544652 NOS1APO75052 506 aaPredicted RBP11.02□□□□□ -0.65
DDX11-227ENST00000544652 FSTL3O95633 263 aa11.02□□□□□ -0.65
DDX11-227ENST00000544652 OCMP0CE72 109 aaPredicted RBP11.02□□□□□ -0.65
DDX11-227ENST00000544652 GIFP27352 417 aa11.02□□□□□ -0.65
DDX11-227ENST00000544652 ZNF93P35789 620 aaPredicted RBP11.02□□□□□ -0.65
DDX11-227ENST00000544652 MTNR1BP49286 362 aa11.02□□□□□ -0.65
DDX11-227ENST00000544652 BLMHQ13867 455 aa11.02□□□□□ -0.65
DDX11-227ENST00000544652 CTF1Q16619 201 aa11.02□□□□□ -0.65
DDX11-227ENST00000544652 HFEQ30201 348 aa11.02□□□□□ -0.65
DDX11-227ENST00000544652 DDI2Q5TDH0 399 aa11.02□□□□□ -0.65
DDX11-227ENST00000544652 HAGHLQ6PII5 290 aaPredicted RBP11.02□□□□□ -0.65
DDX11-227ENST00000544652 PRSS57Q6UWY2 283 aa11.02□□□□□ -0.65
DDX11-227ENST00000544652 ZNF826PQ6ZT77 177 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms